Summary of Study ST002519

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001620. The data can be accessed directly via it's Project DOI: 10.21228/M89B04 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST002519
Study TitleTime course 3: Growth of Eggerthella lenta in defined media with some samples receiving 13C6 stable isotope labeled arginine (intracellular samples)
Study TypeUntargeted LC-MS
Study SummaryThis dataset contains untargeted metabolomics analysis of supernatants from Eggerthella lenta grown in defined EDM1 media. One set of samples grew in EDM1 containing 13C6 stable isotope labeled arginine. Samples were collected at a subset of time points for extraction of intracellular metabolites.
Institute
University of California, San Francisco
Last NameNoecker
First NameCecilia
Address513 Parnassus Ave HSW1501, San Francisco, CA 94143
Emailcecilia.noecker@ucsf.edu
Phone415-502-3264
Submit Date2023-03-22
Raw Data AvailableYes
Raw Data File Type(s)mzML, raw(Thermo)
Analysis Type DetailLC-MS
Release Date2023-04-09
Release Version1
Cecilia Noecker Cecilia Noecker
https://dx.doi.org/10.21228/M89B04
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Factors:

Subject type: Bacteria; Subject species: Eggerthella lenta (Factor headings shown in green)

mb_sample_id local_sample_id Strain ArgGroup TimePoint Time
SA253964MSA00052243 HR TP3 44
SA253965MSA00032243 HR TP3 44
SA253966MSA00012243 HR TP3 44
SA253967MSA00182243 HR TP4 56
SA253968MSA00042243 HR TP4 56
SA253969MSA00092243 HR TP4 56
SA253970MSA00172243 R TP3 44
SA253971MSA00142243 R TP3 44
SA253972MSA00062243 R TP3 44
SA253973MSA00192243 R TP4 56
SA253974MSA00082243 R TP4 56
SA253975MSA00152243 R TP4 56
SA253956QC2- - - -
SA253957QC4- - - -
SA253958QC3- - - -
SA253959BK1- - - -
SA253960BK2- - - -
SA253961BK3- - - -
SA253962BK4- - - -
SA253963QC1- - - -
SA253976MSA0023c HR TP3 44
SA253977MSA0011c HR TP3 44
SA253978MSA0022c HR TP3 44
SA253979MSA0013c HR TP4 56
SA253980MSA0007c HR TP4 56
SA253981MSA0016c HR TP4 56
SA253982MSA0010c R TP3 44
SA253983MSA0012c R TP3 44
SA253984MSA0021c R TP3 44
SA253985MSA0002c R TP4 56
SA253986MSA0020c R TP4 56
SA253987MSA0024c R TP4 56
Showing results 1 to 32 of 32
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