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MB Sample ID: SA174349
| Local Sample ID: | 20190525_Indranil_pos_spme_meta5_1 |
| Subject ID: | SU001938 |
| Subject Type: | Cultured cells |
| Subject Species: | Homo sapiens |
| Taxonomy ID: | 9606 |
| Gender: | Female |
Select appropriate tab below to view additional metadata details:
Combined analysis:
| Analysis ID | AN003017 |
|---|---|
| Analysis type | MS |
| Chromatography type | Reversed phase |
| Chromatography system | Thermo Scientific EASY-nLC 1200 System |
| Column | Thermo Easy Spray |
| MS Type | ESI |
| MS instrument type | Orbitrap |
| MS instrument name | Thermo Q Exactive HF hybrid Orbitrap |
| Ion Mode | POSITIVE |
| Units | Neutral Mass |
MS:
| MS ID: | MS002806 |
| Analysis ID: | AN003017 |
| Instrument Name: | Thermo Q Exactive HF hybrid Orbitrap |
| Instrument Type: | Orbitrap |
| MS Type: | ESI |
| MS Comments: | For metabolite identifications we used the R package MAIT (Fernández-Albert et al., 2014), which integrates peak detection, peak annotation and statistical analysis. Briefly, XCMS (Tautenhahn et al., 2012) is used to detect and align peaks followed by annotation with CAMERA (Kuhl et al., 2012). A special function ‘Biotransformations’ is applied to refine annotations and measured ions are then putatively identified by matching mass-to-charge ratios to a reference list of calculated masses of metabolites listed in the Human Metabolome Database (HMDB, http://www.hmdb.ca, 2019). |
| Ion Mode: | POSITIVE |
