Summary of Study ST001155
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000774. The data can be accessed directly via it's Project DOI: 10.21228/M8N096 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001155 |
| Study Title | The Effect of Silicon on Salinity Tolerance and the Associated Metabolomics Profile Changes in Date Palm |
| Study Summary | Silicon has a promising role in the growth and salinity tolerance in plants. While the results obtained from the current study showed that silicon enhanced growth in date palm seedlings, the mechanism behind this observation was also investigated by studying changes occurred in metabolomic profiles triggered by silicon under salinity. The global metabolomic analysis using liquid-chromatography-mass-spectrometry revealed the presence of a number significantly (p ≤ 0.05) accumulated metabolites in leaves and roots when plants were irrigated with silicon and grown under control and salinity conditions. |
| Institute | Sultan Qaboos University |
| Department | Biology |
| Last Name | Yaish |
| First Name | Mahmoud |
| Address | Sultan Qaboos University, Department of Biology, College of Science |
| mack.yaish@gmail.com | |
| Phone | 968 24146823 |
| Submit Date | 2019-03-18 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | metdb |
| Analysis Type Detail | LC-MS |
| Release Date | 2020-03-18 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
| Analysis ID | AN001911 | AN001912 |
|---|---|---|
| Analysis type | MS | MS |
| Chromatography type | HILIC | Reversed phase |
| Chromatography system | Thermo Q-Exactive | Thermo Q-Exactive |
| Column | Zic-pHILIC 0.5 x 150 mm | 0.5 x 100 mm PLRPS column |
| MS Type | ESI | ESI |
| MS instrument type | Orbitrap | Orbitrap |
| MS instrument name | Thermo Q Exactive Orbitrap | Thermo Q Exactive Orbitrap |
| Ion Mode | UNSPECIFIED | UNSPECIFIED |
| Units | log10(peak area) | log10(peak area) |
MS:
| MS ID: | MS001767 |
| Analysis ID: | AN001911 |
| Instrument Name: | Thermo Q Exactive Orbitrap |
| Instrument Type: | Orbitrap |
| MS Type: | ESI |
| MS Comments: | Samples were injected onto the LC-MS and data was acquired in polarity switching mode with data dependent acquisition of MS/MS spectra. The ion mode is polarity-switching, which means it scans in positive and negative ion mode during the sample run, switching between the two modes about every 20 milliseconds. |
| Ion Mode: | UNSPECIFIED |
| MS ID: | MS001768 |
| Analysis ID: | AN001912 |
| Instrument Name: | Thermo Q Exactive Orbitrap |
| Instrument Type: | Orbitrap |
| MS Type: | ESI |
| MS Comments: | Samples were injected onto the LC-MS and data was acquired in polarity switching mode with data dependent acquisition of MS/MS spectra. The ion mode is polarity-switching, which means it scans in positive and negative ion mode during the sample run, switching between the two modes about every 20 milliseconds. |
| Ion Mode: | UNSPECIFIED |
