Summary of project PR000639

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench,, where it has been assigned Project ID PR000639. The data can be accessed directly via it's Project DOI: 10.21228/M82T15 This work is supported by NIH grant, U2C- DK119886.


Project ID: PR000639
Project DOI:doi: 10.21228/M82T15
Project Title:Longitudinal Multiomics of the Human Microbiome in Inflammatory Bowel Disease
Project Summary:The Inflammatory Bowel Disease (IBD) Multi'omics Database (IBDMDB) includes multi’omics measurements from over 100 subjects, sampled biweekly over up to a year in both adult and pediatric patients with IBD (Crohn’s disease and ulcerative colitis), along with non-IBD controls. Data types include fecal metagenomes, metatranscriptomes, metabolomes, and proteomes, as well as host genetics, intestinal biopsy transcriptomes, epigenetics, and 16S amplicon profiles. Subjects’ medical histories and demographics are collected at baseline and medication, diet, and disease activity profiled longitudinally.
Institute:Broad Institute of MIT and Harvard
Last Name:Avila-Pacheco
First Name:Julian
Address:415 Main Street, Rm 7175, Cambridge, MA, 02142, USA
Funding Source:NIDDK 8U54DK102557
Contributors:Courtney Dennis, Kerry Pierce, Kevin Bullock, Amy Deik, Clary Clish, Curtis Huttenhower, Ramnik Xavier, Hera Vlamakis, Tiffany Poon, Eric Franzosa, Jason Lloyd-Price, Cesar Arze, Melanie Schirmer, Elizabeth Andrews

Summary of all studies in project PR000639

Study IDStudy TitleSpeciesInstituteAnalysis
(* : Contains Untargted data)
(* : Contains raw data)
ST000923 Longitudinal Metabolomics of the Human Microbiome in Inflammatory Bowel Disease Homo sapiens Broad Institute of MIT and Harvard MS* 2018-02-07 1 546 Uploaded data (352.3G)*