Summary of project PR001024
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001024. The data can be accessed directly via it's Project DOI: 10.21228/M8B984 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Project ID: | PR001024 |
| Project DOI: | doi: 10.21228/M8B984 |
| Project Title: | Role of Diet in the Reconstitution of the Human Gut Microbiome and its Metabolome |
| Project Type: | Observational study |
| Project Summary: | We studied the impact of three divergent diets, vegan, omnivore, and a synthetic enteral nutrition (EEN) diet lacking fiber, on the human gut microbiome and its metabolome in a longitudinal analysis that included a microbiota depletion intervention. Hybrid nontargeted LC-MS methods were used to profile stool and plasma metabolites. |
| Institute: | Broad Institute of MIT and Harvard |
| Last Name: | Clish |
| First Name: | Clary |
| Address: | 415 Main Street, Cambridge, MA, 02142, USA |
| Email: | clary@broadinstitute.org |
| Phone: | 617-714-7654 |
| Funding Source: | Crohn’s & Colitis Foundation, P30 DK 050306, PennCHOP Microbiome Program, and the Penn Center for Nutritional Science and Medicine |
| Contributors: | Ceylan Tanes, Kyle Bittinger, Yuan Gao, Elliot S. Friedman, Lisa Nessel, Unmesha Roy Paladhi, Lillian Chau, Erika Panfen, Michael A. Fischbach, Jonathan Braun, Ramnik J. Xavier, Clary B. Clish, Hongzhe Li, Frederic D. Bushman, James D. Lewis, Gary D. Wu |
Summary of all studies in project PR001024
| Study ID | Study Title | Species | Institute | Analysis(* : Contains Untargted data) | Release Date | Version | Samples | Download(* : Contains raw data) |
|---|---|---|---|---|---|---|---|---|
| ST001519 | Stool metabolites of known identity profiled using hybrid nontargeted methods (part-I) | Homo sapiens | Broad Institute of MIT and Harvard | MS | 2021-04-01 | 1 | 166 | Uploaded data (148.3G)* |
| ST001520 | Stool unknowns profiled using hybrid nontargeted methods (part-II) | Homo sapiens | Broad Institute of MIT and Harvard | MS* | 2021-04-01 | 1 | 166 | Uploaded data (33.1M)* |
| ST001521 | Plasma metabolites of known identity profiled using hybrid nontargeted methods (part-III) | Homo sapiens | Broad Institute of MIT and Harvard | MS | 2021-04-01 | 1 | 160 | Not available |
| ST001522 | Plasma unknowns profiled using hybrid nontargeted methods (part-IV) | Homo sapiens | Broad Institute of MIT and Harvard | MS* | 2021-08-10 | 1 | 160 | Uploaded data (17M)* |
