Summary of Study ST000477

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000363. The data can be accessed directly via it's Project DOI: 10.21228/M84C7K This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

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Study IDST000477
Study TitleA metabolomics approach to document compliance with long-term almond consumption
Study SummaryTo develop an analytical approach that identifies metabolic profiles associated with long-term almond consumption
Institute
Purdue University
Last NameDhillon
First NameJaapna
Address700 West State Street
Emailjdhillon@purdue.edu
Phone7654962791
Submit Date2016-06-29
Study CommentsW12 refers to week 12 time point, BL refers to baseline time point
Raw Data File Type(s)d
Analysis Type DetailLC-MS
Release Date2016-12-22
Release Version1
Jaapna Dhillon Jaapna Dhillon
https://dx.doi.org/10.21228/M84C7K
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Project:

Project ID:PR000363
Project DOI:doi: 10.21228/M84C7K
Project Title:A metabolomics approach to document compliance with long-term almond consumption
Project Summary:To develop an analytical approach that identifies metabolic profiles associated with long-term almond consumption
Institute:Purdue University
Last Name:Dhillon
First Name:Jaapna
Address:700 West State Street
Email:jdhillon@purdue.edu
Phone:7654962791

Subject:

Subject ID:SU000498
Subject Type:Human
Subject Species:Homo sapiens
Taxonomy ID:9606
Species Group:Human

Factors:

Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id local_sample_id time group
SA024370S44_MS14BL almond
SA024371S37_MS5BL almond
SA024372S67_MS65BL almond
SA024373S83_MS79BL almond
SA024374S57_MS3BL almond
SA024375S51_MS1BL almond
SA024376S69_MS35BL almond
SA024377S81_MS101BL almond
SA024378S78_MS82BL almond
SA024379S66_MS24BL almond
SA024380S52_MS55BL almond
SA024381S50_MS25BL almond
SA024382S38_MS57BL almond
SA024383S34_MS105BL almond
SA024384S75_MS109BL almond
SA024385S74_MS84BL almond
SA024386S62_MS15BL almond
SA024387S60_MS75BL almond
SA024388S85_MS103BL almond
SA024389S46_MS96BL almond
SA024390S59_MS110BL almond
SA024391S33_MS8BL almond
SA024392S72_MS73BL almond
SA024393S45_MS95BL almond
SA024394S89_MS113BL almond
SA024395S86_MS88BL almond
SA024396S49_MS68BL control
SA024397S56_MS2BL control
SA024398S63_MS4BL control
SA024399S82_MS80BL control
SA024400S61_MS104BL control
SA024401S58_MS36BL control
SA024402S65_MS17BL control
SA024403S84_MS46BL control
SA024404S55_MS77BL control
SA024405S48_MS78BL control
SA024406S53_MS47BL control
SA024407S43_MS27BL control
SA024408S88_MS87BL control
SA024409S36_MS11BL control
SA024410S71_MS85BL control
SA024411S35_MS12BL control
SA024412S32_MS7BL control
SA024413S91_MS86BL control
SA024414S73_MS71BL control
SA024415S70_MS37BL control
SA024416S79_MS16BL control
SA024417S42_MS13BL control
SA024418S87_MS98BL control
SA024419S68_MS94BL control
SA024420S40_MS45BL control
SA024421S39_MS6BL control
SA024422S74_MS52W12 almond
SA024423S75_MS90W12 almond
SA024424S81_MS92W12 almond
SA024425S78_MS63W12 almond
SA024426S62_MS115W12 almond
SA024427S66_MS108W12 almond
SA024428S67_MS67W12 almond
SA024429S72_MS72W12 almond
SA024430S69_MS116W12 almond
SA024431S51_MS21W12 almond
SA024432S34_MS66W12 almond
SA024433S37_MS30W12 almond
SA024434S38_MS34W12 almond
SA024435S83_MS43W12 almond
SA024436S33_MS60W12 almond
SA024437S31_MS29W12 almond
SA024438S26_MS58W12 almond
SA024439S27_MS48W12 almond
SA024440S89_MS114W12 almond
SA024441S30_MS18W12 almond
SA024442S44_MS51W12 almond
SA024443S86_MS33W12 almond
SA024444S52_MS107W12 almond
SA024445S45_MS26W12 almond
SA024446S23_MS39W12 almond
SA024447S59_MS56W12 almond
SA024448S50_MS91W12 almond
SA024449S46_MS44W12 almond
SA024450S57_MS32W12 almond
SA024451S60_MS74W12 almond
SA024452S85_MS89W12 almond
SA024453S91_MS54W12 control
SA024454S84_MS106W12 control
SA024455S87_MS10W12 control
SA024456S88_MS23W12 control
SA024457S79_MS112W12 control
SA024458S82_MS53W12 control
SA024459S58_MS93W12 control
SA024460S36_MS40W12 control
SA024461S39_MS20W12 control
SA024462S40_MS9W12 control
SA024463S42_MS61W12 control
SA024464S35_MS50W12 control
SA024465S32_MS19W12 control
SA024466S24_MS49W12 control
SA024467S25_MS59W12 control
SA024468S28_MS38W12 control
SA024469S29_MS28W12 control
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Collection:

Collection ID:CO000492
Collection Summary:Fasting blood samples (5 ml) were collected from participants at baseline and the end of the 12 week intervention into vacutainers with EDTA
Sample Type:Blood

Treatment:

Treatment ID:TR000512
Treatment Summary:N/A

Sample Preparation:

Sampleprep ID:SP000505
Sampleprep Summary:The erythrocytes were separated from the plasma by centrifugation and frozen at -80ºC and were were prepared by hemolyzing the cells two times in deionized distilled water followed by centrifugation at 4000 RPM for 10 minutes at 4ºC. The erythrocyte aliquots were stored at −80 ºC until further analysis. The lipid extracts were prepared using a procedure by Rose and Oklander (Rose and Oklander 1965).

Combined analysis:

Analysis ID AN000742 AN000743
Analysis type MS MS
Chromatography type None (Direct infusion) None (Direct infusion)
Chromatography system None None
Column none none
MS Type ESI ESI
MS instrument type Triple quadrupole Triple quadrupole
MS instrument name Agilent 6460 QQQ Agilent 6460 QQQ
Ion Mode POSITIVE NEGATIVE
Units m/z value m/z value

Chromatography:

Chromatography ID:CH000534
Instrument Name:None
Column Name:none
Chromatography Type:None (Direct infusion)

MS:

MS ID:MS000659
Analysis ID:AN000742
Instrument Name:Agilent 6460 QQQ
Instrument Type:Triple quadrupole
MS Type:ESI
Ion Mode:POSITIVE
  
MS ID:MS000660
Analysis ID:AN000743
Instrument Name:Agilent 6460 QQQ
Instrument Type:Triple quadrupole
MS Type:ESI
Ion Mode:NEGATIVE
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