Summary of study ST000162

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000135. The data can be accessed directly via it's Project DOI: 10.21228/M8D010 This work is supported by NIH grant, U2C- DK119886.

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Study IDST000162
Study TitleYeast glycolysis in normoxia and hypoxia (150121_pkf2)
Study TypeYeast glycolysis
Study SummaryAnalyze yeast glycolysis
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Email mkachman@umich.edu
Submit Date2015-02-03
Num Groups12
Total Subjects12
Raw Data AvailableYes
Raw Data File Type(s).xml,.xsd,.stg, .bin, .cd,.cG, .m
Uploaded File Size2.2 G
Analysis Type DetailLC-MS
Release Date2015-04-28
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M8D010
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:


Project:

Project ID:PR000135
Project DOI:doi: 10.21228/M8D010
Project Title:pfk2
Project Summary:Yeast glycolysis in normoxia and hypoxia
Institute:University of Michigan
Department:LSI & Human Genetics
Laboratory:Kim Lab
Last Name:Kim
First Name:John
Address:Ann Arbor, MI
Email:jnkim@umich.edu
Phone:734-615-9915

Subject:

Subject ID:SU000181
Subject Type:Yeast cells
Subject Species:Saccharomyces cerevisiae
Taxonomy ID:4932
Species Group:Microorganism

Factors:

Subject type: Yeast cells; Subject species: Saccharomyces cerevisiae (Factor headings shown in green)

mb_sample_id local_sample_id strain O2
SA008616S00017179aro1D -
SA008618S00017185aro1D -
SA008615S00017176aro1D +
SA008617S00017182aro1D +
SA008620S00017180atp1D -
SA008622S00017186atp1D -
SA008619S00017177atp1D +
SA008621S00017183atp1D +
SA008614S00017184WT-
SA008613S00017181WT+
SA008612S00017178WT -
SA008611S00017175WT +
Showing results 1 to 12 of 12

Collection:

Collection ID:CO000167
Sample Type:Saccharomyces cerevisiae

Treatment:

Treatment ID:TR000187

Sample Preparation:

Sampleprep ID:SP000181
Sampleprep Protocol Filename:Gly-TCA-nucleotides_analysis_protocol-2015-03-09.docx

Combined analysis:

Analysis ID AN000254
Analysis type MS
Chromatography type HILIC
Chromatography system Agilent 1260
Column Phenomenex Luna NH2 (150 x 1mm, 3um)
MS Type ESI
MS instrument type QTOF
MS instrument name Agilent 6520 QTOF
Ion Mode NEGATIVE
Units mM

Chromatography:

Chromatography ID:CH000179
Methods ID:AQM020
Methods Filename:QTOF-002-HILIC-35min-1mm.m.zip
Instrument Name:Agilent 1260
Column Name:Phenomenex Luna NH2 (150 x 1mm, 3um)
Chromatography Type:HILIC

MS:

MS ID:MS000204
Analysis ID:AN000254
Instrument Name:Agilent 6520 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:NEGATIVE
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