Summary of study ST000171

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000148. The data can be accessed directly via it's Project DOI: 10.21228/M8V011 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

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Study IDST000171
Study Titlecell metabolomics (metabolic phenotypes of a clock mutant mouse)
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Email mkachman@umich.edu
Submit Date2014-04-01
Num Groups11
Total Subjects11
Raw Data AvailableYes
Raw Data File Type(s).xml, .xsd, .bin, .loG
Uploaded File Size4.0 M
Analysis Type DetailGC-MS
Release Date2015-06-28
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M8V011
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Project:

Project ID:PR000148
Project DOI:doi: 10.21228/M8V011
Project Title:trcp
Project Summary:metabolic phenotypes of a clock mutant mouse
Institute:Florida State University
Department:Biomedical Sciences
Laboratory:Lee Lab
Last Name:Lee
First Name:Choogon
Address:Tallahassee, FL
Email:choogon.lee@med.fsu.edu
Phone:850-645-1478

Subject:

Subject ID:SU000190
Subject Type:Animal
Subject Species:Mus musculus
Taxonomy ID:10090
Species Group:Mammal

Factors:

Subject type: Animal; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id Type
SA009365S00013516control
SA009366S00013518control cell1
SA009367S00013519control cell2
SA009368S00013520control cell3
SA009369S00013521control cell4
SA009370S00013517ko
SA009371S00013522ko cell1
SA009372S00013523ko cell2
SA009373S00013524ko cell3
SA009374S00013525ko cell4
SA009375S00013515starting medium
Showing results 1 to 11 of 11

Collection:

Collection ID:CO000177
Sample Type:Fibroblasts

Treatment:

Treatment ID:TR000197

Sample Preparation:

Sampleprep ID:SP000191
Sampleprep Protocol Filename:Gly-TCA-nucleotides_analysis_protocol-2015-03-09.docx

Combined analysis:

Analysis ID AN000265
Analysis type MS
Chromatography type GC
Chromatography system
Column Agilent DB5-MS (30m × 0.25mm, 0.25um)
MS Type EI
MS instrument type Single quadrupole
MS instrument name Agilent 5975C
Ion Mode POSITIVE
Units µM

Chromatography:

Chromatography ID:CH000188
Methods ID:AQM011
Methods Filename:ALPHA_KETO_ACIDS-FULL.M.zip
Column Name:Agilent DB5-MS (30m × 0.25mm, 0.25um)
Chromatography Type:GC

MS:

MS ID:MS000214
Analysis ID:AN000265
Instrument Name:Agilent 5975C
Instrument Type:Single quadrupole
MS Type:EI
Ion Mode:POSITIVE
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