Summary of Study ST000283

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000140. The data can be accessed directly via it's Project DOI: 10.21228/M8W01B This work is supported by NIH grant, U2C- DK119886.

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Study IDST000283
Study TitlePlasma Nucleotide/adenosine concentrations (Human AxP Batch 4)
Study TypeGlycolysis/TCA/Nucleotide analysis (tissue/cells)
Study SummaryThis experiment was performed using the following cohorts: 1) healthy controls, 2) patients with scleroderma at low risk for pulmonary hypertension, 3) pateints with scleroderma at high risk for pulmonary hypertension. Whole blood was drawn directly into stop soilution (1:1 ratio) at rest and again at peak exercise for each human subject.
Institute
University of Michigan
DepartmentInternal Medicine-Cardiology
LaboratoryVisovatti Lab
Last NameRobichaud
First NamePatrick
AddressAnn Arbor, MI
Emailprobicha@umich.edu
Phone734-936-7603
Submit Date2015-01-20
Num Groups4
Total Subjects15
Raw Data File Type(s)d
Analysis Type DetailLC-MS
Release Date2016-01-13
Release Version1
Patrick Robichaud Patrick Robichaud
https://dx.doi.org/10.21228/M8W01B
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:


Project:

Project ID:PR000140
Project DOI:doi: 10.21228/M8W01B
Project Title:Human AxP Studies
Project Type:Glycolysis/TCA/Nucleotide analysis (tissue/cells)
Project Summary:Plasma Nucleotide/adenosine concentrations
Institute:University of Michigan
Department:Internal Medicine-Cardiology
Laboratory:Visovatti Lab
Last Name:Visovatti
First Name:Scott
Address:Ann Arbor, MI
Email:shv@med.umich.edu
Phone:734-657-6917

Subject:

Subject ID:SU000303
Subject Type:Animal
Subject Species:Homo sapiens
Taxonomy ID:9606
Species Group:Human

Factors:

Subject type: Animal; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id local_sample_id EXERCISE GROUP
SA012322S00017057No Healthy
SA012323S00017061No Healthy
SA012324S00017065No SSc Cath
SA012325S00017063No SSc Cath
SA012326S00017059No SSc Cath
SA012327S00017067No SSc Cath
SA012328S00017053No SSc Cath
SA012329S00017055No SSc Cath
SA012330S00017060Yes Healthy
SA012331S00017056Yes Healthy
SA012332S00017066Yes SSc Cath
SA012333S00017064Yes SSc Cath
SA012334S00017058Yes SSc Cath
SA012335S00017062Yes SSc Cath
SA012336S00017054Yes SSc Cath
Showing results 1 to 15 of 15

Collection:

Collection ID:CO000297
Collection Summary:-
Sample Type:Plasma

Treatment:

Treatment ID:TR000317

Sample Preparation:

Sampleprep ID:SP000311
Sampleprep Summary:-
Sampleprep Protocol Filename:Gly-TCA-nucleotides_analysis_protocol-2015-03-09.docx

Combined analysis:

Analysis ID AN000451
Analysis type MS
Chromatography type Reversed phase
Chromatography system Waters Acquity
Column Waters Acquity HSS T3
MS Type ESI
MS instrument type QTOF
MS instrument name Agilent 6530 QTOF
Ion Mode NEGATIVE
Units nM

Chromatography:

Chromatography ID:CH000322
Methods ID:AQM016
Methods Filename:QQQ-ATP_ADP_AMP_A-update.m.zip
Instrument Name:Waters Acquity
Column Name:Waters Acquity HSS T3
Chromatography Type:Reversed phase

MS:

MS ID:MS000392
Analysis ID:AN000451
Instrument Name:Agilent 6530 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:NEGATIVE
Acquisition Parameters File:QQQ-ATP_ADP_AMP_A-update.m.zip
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