Summary of study ST000722

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000519. The data can be accessed directly via it's Project DOI: 10.21228/M8KD56 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

Perform statistical analysis  |  Show all samples  |  Show named metabolites  |  Download named metabolite data  |  Download all metabolite data  |  Perform analysis on untargeted data  |  Download mwTab file (text)   |  Download mwTab file(JSON)   |  Download data (Contains raw data)
Study IDST000722
Study TitleMetabolomics of Diapause in Aedes albopictus
Study TypeMS analysis
Study SummaryReplicate populations of Aedes albopictus were reared under diapause-inducing short day photoperiod (8h light: 16h dark) and diapause-averting long day photoperiod (16h light:8h dark). Eggs were collected from each replicate and snap-frozen 11d post-oviposition. We hope to characterize the metabolomic and lipidomic profiles of diapausing eggs relative to non-diapause eggs.
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Emailmkachman@med.umich.edu
Phone(734) 232-8175
Submit Date2017-06-19
Num Groups2
Total Subjects16
Raw Data AvailableYes
Raw Data File Type(s).d, .wiff
Analysis Type DetailLC-MS
Release Date2017-12-06
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M8KD56
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:


Project:

Project ID:PR000519
Project DOI:doi: 10.21228/M8KD56
Project Title:Metabolomics of Diapause
Project Type:MS analysis
Project Summary:Comparing the metabolome/lipidome profiles of diapausing and non-diapausing aedes albopictus eggs
Institute:Georgetown University
Department:Department of Biology
Laboratory:Armbruster Lab
Last Name:Armbruster
First Name:Peter
Address:Washington, D.C.
Email:paa9@georgetown.edu
Phone:202-687-2567

Subject:

Subject ID:SU000745
Subject Type:Insect
Subject Species:Aedes albopictus
Taxonomy ID:7160
Species Group:Insect

Factors:

Subject type: Insect; Subject species: Aedes albopictus (Factor headings shown in green)

mb_sample_id local_sample_id Diapause
SA040650S00026045Diapause
SA040651S00026046Diapause
SA040652S00026047Diapause
SA040653S00026036Diapause
SA040654S00026044Diapause
SA040655S00026037Diapause
SA040656S00026039Diapause
SA040657S00026038Diapause
SA040658S00026050Non-Diapause
SA040659S00026051Non-Diapause
SA040660S00026043Non-Diapause
SA040661S00026049Non-Diapause
SA040662S00026048Non-Diapause
SA040663S00026041Non-Diapause
SA040664S00026042Non-Diapause
SA040665S00026040Non-Diapause
Showing results 1 to 16 of 16

Collection:

Collection ID:CO000739
Collection Summary:-
Sample Type:Eggs

Treatment:

Treatment ID:TR000759
Treatment Summary:-

Sample Preparation:

Sampleprep ID:SP000752
Sampleprep Summary:-
Sampleprep Protocol Filename:A003_-_Untargeted_Metabolomics.pdf

Combined analysis:

Analysis ID AN001129 AN001130 AN001131 AN001132
Analysis type MS MS MS MS
Chromatography type Reversed phase Reversed phase Reversed phase Reversed phase
Chromatography system Agilent Agilent Shimadzu CTO-20A Nexera X2 Shimadzu CTO-20A Nexera X2
Column Waters Acquity HSS T3 (50 x 2.1mm, 1.8um) Waters Acquity HSS T3 (50 x 2.1mm, 1.8um) Waters Acquity HSS T3 (50 x 2.1mm, 1.8um) Waters Acquity HSS T3 (50 x 2.1mm, 1.8um)
MS Type ESI ESI ESI ESI
MS instrument type QTOF QTOF Triple TOF Triple TOF
MS instrument name Agilent 6530 QTOF Agilent 6530 QTOF ABI Sciex 5600+ TripleTOF ABI Sciex 5600+ TripleTOF
Ion Mode POSITIVE NEGATIVE NEGATIVE POSITIVE
Units peak area normalized peak area normalized peak area normalized peak area normalized

Chromatography:

Chromatography ID:CH000794
Instrument Name:Agilent
Column Name:Waters Acquity HSS T3 (50 x 2.1mm, 1.8um)
Chromatography Type:Reversed phase
  
Chromatography ID:CH000795
Instrument Name:Shimadzu CTO-20A Nexera X2
Column Name:Waters Acquity HSS T3 (50 x 2.1mm, 1.8um)
Chromatography Type:Reversed phase

MS:

MS ID:MS001024
Analysis ID:AN001129
Instrument Name:Agilent 6530 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:POSITIVE
  
MS ID:MS001025
Analysis ID:AN001130
Instrument Name:Agilent 6530 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:NEGATIVE
  
MS ID:MS001026
Analysis ID:AN001131
Instrument Name:ABI Sciex 5600+ TripleTOF
Instrument Type:Triple TOF
MS Type:ESI
Ion Mode:NEGATIVE
  
MS ID:MS001027
Analysis ID:AN001132
Instrument Name:ABI Sciex 5600+ TripleTOF
Instrument Type:Triple TOF
MS Type:ESI
Ion Mode:POSITIVE
  logo