Summary of study ST000725

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000522. The data can be accessed directly via it's Project DOI: 10.21228/M8667G This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST000725
Study TitleMetabolome, body composition, and muscle performance in children
Study TypeMS analysis
Study SummaryThe purpose of this study is to determine potential relationships between plasma metabolome patterns and body composition in addition to muscle quality and muscular performance in children. Children ages 8 to 10 will complete body composition testing including BMI and skin fold measurements. An ultrasound machine will be used to determine cross-sectional area and echo intensity in the vastus lateralis and rectus femoris muscles as a measure of muscle quality. Isokinetic leg extension strength, power, and fatigability will be determined from a series of maximal knee extensions using an isokinetic dynamometer. An untargeted metabolomics test will be used on a single plasma sample from each subject in order to examine plasma metabolome
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Emailmkachman@med.umich.edu
Phone(734) 232-8175
Submit Date2017-06-19
Num Groups12
Total Subjects11
Raw Data AvailableYes
Raw Data File Type(s).d
Analysis Type DetailLC-MS
Release Date2017-12-06
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M8667G
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:


Project:

Project ID:PR000522
Project DOI:doi: 10.21228/M8667G
Project Title:Metabolome, body composition, and muscle performance in children
Project Type:MS analysis
Project Summary:Examining potential relationships between metabolome, body composition, and muscle performance in children
Institute:University of Kansas
Department:Health, Sport, and Exercise Sciences
Laboratory:Herda Lab
Last Name:Herda
First Name:Trent
Address:Lawrence, KS
Email:t.herda@ku.edu
Phone:785-864-2224

Subject:

Subject ID:SU000748
Subject Type:Human
Subject Species:Homo sapiens
Taxonomy ID:9606
Species Group:Human

Factors:

Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id local_sample_id gender
SA040721S00027746Female
SA040722S00027749Female
SA040723S00027744Female
SA040724S00027745Female
SA040725S00027750Male
SA040726S00027741Male
SA040727S00027742Male
SA040728S00027748Male
SA040729S00027743Male
SA040730S00027747Male
SA040731S00027740Male
Showing results 1 to 11 of 11

Collection:

Collection ID:CO000742
Collection Summary:-
Sample Type:Blood

Treatment:

Treatment ID:TR000762
Treatment Summary:-

Sample Preparation:

Sampleprep ID:SP000755
Sampleprep Summary:-
Sampleprep Protocol Filename:A003_-_Untargeted_Metabolomics.pdf

Combined analysis:

Analysis ID AN001136 AN001137
Analysis type MS MS
Chromatography type Reversed phase Reversed phase
Chromatography system Agilent Agilent
Column Waters Acquity HSS T3 (50 x 2.1mm, 1.8um) Waters Acquity HSS T3 (50 x 2.1mm, 1.8um)
MS Type ESI ESI
MS instrument type QTOF QTOF
MS instrument name Agilent 6530 QTOF Agilent 6530 QTOF
Ion Mode NEGATIVE POSITIVE
Units peak area peak area

Chromatography:

Chromatography ID:CH000798
Instrument Name:Agilent
Column Name:Waters Acquity HSS T3 (50 x 2.1mm, 1.8um)
Chromatography Type:Reversed phase

MS:

MS ID:MS001031
Analysis ID:AN001136
Instrument Name:Agilent 6530 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:NEGATIVE
  
MS ID:MS001032
Analysis ID:AN001137
Instrument Name:Agilent 6530 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:POSITIVE
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