Summary of Study ST000776
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000562. The data can be accessed directly via it's Project DOI: 10.21228/M8196K This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000776 |
| Study Title | Fish Oil distal colon from rats |
| Study Type | MS analysis |
| Study Summary | Fish Oil distal colon from rats. |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@med.umich.edu | |
| Phone | (734) 232-8175 |
| Submit Date | 2017-06-05 |
| Num Groups | 2 |
| Total Subjects | 12 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | wiff |
| Analysis Type Detail | LC-MS |
| Release Date | 2017-12-06 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000562 |
| Project DOI: | doi: 10.21228/M8196K |
| Project Title: | Pilot Grant Award |
| Project Type: | MS analysis |
| Project Summary: | 16 samples from lipodomics |
| Institute: | University of Michigan |
| Department: | Family Medicine |
| Laboratory: | Djuric Lab |
| Last Name: | Djuric |
| First Name: | Zora |
| Address: | Ann Arbor, MI |
| Email: | zoralogn@umich.edu |
| Phone: | 734-615-6210 |
Subject:
| Subject ID: | SU000799 |
| Subject Type: | Rat |
| Subject Species: | Rattus norvegicus |
| Taxonomy ID: | 10116 |
| Species Group: | Mammals |
Factors:
Subject type: Rat; Subject species: Rattus norvegicus (Factor headings shown in green)
| mb_sample_id | local_sample_id | Fish Oil | Tumor |
|---|---|---|---|
| SA042351 | S00021491 | NO | NO |
| SA042352 | S00021489 | NO | NO |
| SA042353 | S00021490 | NO | NO |
| SA042354 | S00021496 | NO | YES |
| SA042355 | S00021495 | NO | YES |
| SA042356 | S00021497 | NO | YES |
| SA042357 | S00021486 | YES | NO |
| SA042358 | S00021488 | YES | NO |
| SA042359 | S00021487 | YES | NO |
| SA042360 | S00021492 | YES | YES |
| SA042361 | S00021493 | YES | YES |
| SA042362 | S00021494 | YES | YES |
| Showing results 1 to 12 of 12 |
Collection:
| Collection ID: | CO000793 |
| Collection Summary: | - |
| Sample Type: | Colon |
Treatment:
| Treatment ID: | TR000813 |
| Treatment Summary: | - |
Sample Preparation:
| Sampleprep ID: | SP000806 |
| Sampleprep Summary: | - |
| Sampleprep Protocol Filename: | A004_-_Shotgun_Lipidomics.pdf |
Chromatography:
| Chromatography ID: | CH000860 |
| Instrument Name: | Shimadzu CTO-20A Nexera X2 |
| Column Name: | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) |
| Column Temperature: | 55 |
| Flow Rate: | 0.400uL/min |
| Solvent A: | 40% acetonitrile/60% water; 10 mM ammonium acetate |
| Solvent B: | 10% acetonitrile/5% water/85% isopropanol; 10 mM ammonium acetate |
| Chromatography Type: | Reversed phase |
Analysis:
| Analysis ID: | AN001226 |
| Analysis Type: | MS |
| Analysis Protocol File: | A004_-_Shotgun_Lipidomics.pdf |
| Instrument Name: | TripleTOF 5600+ (Absciex) |
| Chromatography ID: | CH000860 |
| Num Factors: | 4 |
| Num Metabolites: | 251 |
| Rt Units: | Minutes |
| Units: | peak area normalized |
| Analysis ID: | AN001227 |
| Analysis Type: | MS |
| Analysis Protocol File: | A004_-_Shotgun_Lipidomics.pdf |
| Instrument Name: | TripleTOF 5600+ (Absciex) |
| Chromatography ID: | CH000860 |
| Num Factors: | 4 |
| Num Metabolites: | 298 |
| Rt Units: | Minutes |
| Units: | peak area normalized |
