Summary of Study ST002019

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001282. The data can be accessed directly via it's Project DOI: 10.21228/M80Q51 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

Perform statistical analysis  |  Show all samples  |  Show named metabolites  |  Download named metabolite data  
Download mwTab file (text)   |  Download mwTab file(JSON)
Study IDST002019
Study TitleTIPs Metabolomics (blood)
Study SummaryA prospective cohort of 38 European (EA) and African American (AA) omnivorous females were recruited. Samples were collected pre-intervention while subjects consumed habitual animal-based diet, and following 4 days of interventional vegetarian diet.
Institute
Vanderbilt University Medical Center
Last NameFerguson
First NameJane
Address2220 Pierce Ave, PRB 354, Nashville, TN, 37232, USA
Emailjane.f.ferguson@vumc.org
Phone6158759896
Submit Date2021-12-13
Analysis Type DetailMS
Release Date2022-02-02
Release Version1
Jane Ferguson Jane Ferguson
https://dx.doi.org/10.21228/M80Q51
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:


Project:

Project ID:PR001282
Project DOI:doi: 10.21228/M80Q51
Project Title:TIPs Metabolomics
Project Summary:Healthy omnivorous women underwent a short-term dietary intervention. Plasma and urine samples were collected before and after the 4-day vegetarian diet.
Institute:Vanderbilt University Medical Center
Last Name:Ferguson
First Name:Jane
Address:2220 Pierce Ave, PRB 354, Nashville, TN, 37232, USA
Email:jane.f.ferguson@vumc.org
Phone:6158759896

Subject:

Subject ID:SU002101
Subject Type:Human
Subject Species:Homo sapiens
Taxonomy ID:9606
Gender:Female

Factors:

Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id local_sample_id Diet Study Phase
SA189207MB-13_V2Post 1
SA189208MB-12_V2Post 1
SA189209MB-11_V2Post 1
SA189210MB-14_V2Post 1
SA189211MB-09_V2Post 1
SA189212MB-15_V2Post 1
SA189213MB-19_V2Post 1
SA189214MB-17_V2Post 1
SA189215MB-16_V2Post 1
SA189216MB-08_V2Post 1
SA189217MB-10_V2Post 1
SA189218MB-04_V2Post 1
SA189219MB-03_V2Post 1
SA189220MB-02_V2Post 1
SA189221MB-06_V2Post 1
SA189222MB-05_V2Post 1
SA189223MB-07_V2Post 1
SA189224MB-38_V2Post 2
SA189225MB-25_V2Post 2
SA189226MB-24_V2Post 2
SA189227MB-35_V2Post 2
SA189228MB-33_V2Post 2
SA189229MB-22_V2Post 2
SA189230MB-23_V2Post 2
SA189231MB-26_V2Post 2
SA189232MB-37_V2Post 2
SA189233MB-30_V2Post 2
SA189234MB-32_V2Post 2
SA189235MB-31_V2Post 2
SA189236MB-36_V2Post 2
SA189237MB-29_V2Post 2
SA189238MB-27_V2Post 2
SA189239MB-34_V2Post 2
SA189240MB-21_V2Post 2
SA189241MB-20_V2Post 2
SA189242MB-09_V1Pre 1
SA189243MB-10_V1Pre 1
SA189244MB-11_V1Pre 1
SA189245MB-13_V1Pre 1
SA189246MB-08_V1Pre 1
SA189247MB-07_V1Pre 1
SA189248MB-03_V1Pre 1
SA189249MB-04_V1Pre 1
SA189250MB-05_V1Pre 1
SA189251MB-06_V1Pre 1
SA189252MB-14_V1Pre 1
SA189253MB-12_V1Pre 1
SA189254MB-19_V1Pre 1
SA189255MB-02_V1Pre 1
SA189256MB-16_V1Pre 1
SA189257MB-17_V1Pre 1
SA189258MB-15_V1Pre 1
SA189259MB-23_V1Pre 2
SA189260MB-36_V1Pre 2
SA189261MB-29_V1Pre 2
SA189262MB-37_V1Pre 2
SA189263MB-20_V1Pre 2
SA189264MB-22_V1Pre 2
SA189265MB-38_V1Pre 2
SA189266MB-35_V1Pre 2
SA189267MB-24_V1Pre 2
SA189268MB-26_V1Pre 2
SA189269MB-31_V1Pre 2
SA189270MB-21_V1Pre 2
SA189271MB-32_V1Pre 2
SA189272MB-25_V1Pre 2
SA189273MB-34_V1Pre 2
SA189274MB-27_V1Pre 2
SA189275MB-33_V1Pre 2
SA189276MB-30_V1Pre 2
Showing results 1 to 70 of 70

Collection:

Collection ID:CO002094
Collection Summary:Whole blood (EDTA tube) and midstream urine samples were collected in the early mornings of study days 1 and 6 with subjects in a 10-hour fasted state.
Sample Type:Blood (plasma)

Treatment:

Treatment ID:TR002113
Treatment Summary:All participants completed a dietary intervention. Vegetarian menus encompassing four days of 3 meals and 2 snacks per day were developed. Menus were designed to be a major shift from habitual omnivorous intakes by eliminating all meat, fish, poultry, eggs, and dairy products.

Sample Preparation:

Sampleprep ID:SP002107
Sampleprep Summary:Plasma samples were prepared for metabolomics anayses at Metabolon Inc.

Combined analysis:

Analysis ID AN003289
Analysis type MS
Chromatography type None (Direct infusion)
Chromatography system none
Column none
MS Type ESI
MS instrument type Other
MS instrument name Thermo Q Exactive Orbitrap
Ion Mode UNSPECIFIED
Units scaled imputed

Chromatography:

Chromatography ID:CH002429
Instrument Name:none
Column Name:none
Chromatography Type:None (Direct infusion)

MS:

MS ID:MS003060
Analysis ID:AN003289
Instrument Name:Thermo Q Exactive Orbitrap
Instrument Type:Other
MS Type:ESI
MS Comments:Extracts were divided into fractions for analysis: two for analysis by two separate reverse phase (RP)/UPLC-MS/MS methods with positive ion mode electrospray ionization (ESI), one for analysis by RP/UPLC-MS/MS with negative ion mode ESI, and one for analysis by HILIC/UPLC-MS/MS with negative ion mode ESI.
Ion Mode:UNSPECIFIED
  logo