Metabolomics Structure Database

 
MW REGNO: 3472
Common Name:Tridecanal
Systematic Name:tridecanal
RefMet Name:Tridecanal
Synonyms: [PubChem Synonyms]
Exact Mass:
198.1984 (neutral)    Calculate m/z:
Formula:C13H26O
InChIKey:BGEHHAVMRVXCGR-UHFFFAOYSA-N
LIPID MAPS Category:Fatty Acyls [FA]
LIPID MAPS mainclass:Fatty aldehydes [FA06]
Massbank MS spectra:View MS spectra
SMILES:CCCCCCCCCCCCC=O
Studies:Available studies (via RefMet name)

Select appropriate tab below to view additional details:

External database links:

PubChem CID:25311
LIPID MAPS ID:LMFA06000074
CHEBI ID:89816
HMDB ID:HMDB0030928
Chemspider ID:23643
EPA CompTox DB:DTXCID501682
Plant Metabolite Hub(Pmhub):MS000051706

Calculated physicochemical properties (?):

Heavy Atoms: 14  
Rings: 0  
Aromatic Rings: 0  
Rotatable Bonds: 11  
van der Waals Molecular volume: 239.61 Å3 molecule-1  
Toplogical Polar Sufrace Area: 17.07 Å2 molecule-1  
Hydrogen Bond Donors: 0  
Hydrogen Bond Acceptors: 1  
logP: 4.50  
Molar Refractivity: 62.53  
Fraction sp3 Carbons: 0.92  
sp3 Carbons: 12  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y
NPClassifier classification: "NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products", Kim HW, Wang M, Leber CA, Nothias LF, Reher R, Kang KB, van der Hooft JJJ, Dorrestein PC, Gerwick WH and Cottrell GW. J Nat Prod. 2021 Nov 26;84(11):2795-2807.DOI: 10.1021/acs.jnatprod.1c00399.

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