Metabolomics Structure Database

 
MW REGNO: 37496
Common Name:Trimethylamine
Systematic Name:trimethylamine
RefMet Name:Trimethylamine
Synonyms: [PubChem Synonyms]
Exact Mass:
59.0735 (neutral)    Calculate m/z:
Formula:C3H9N
InChIKey:GETQZCLCWQTVFV-UHFFFAOYSA-N
ClassyFire superclass:Organic nitrogen compounds
ClassyFire class:Organonitrogen compounds
ClassyFire subclass:Amines
ClassyFire direct parent:Trialkylamines
Massbank MS spectra:View MS spectra
NP-MRD NMR spectra:View NMR spectra
SMILES:CN(C)C
Studies:Available studies (via RefMet name)

Select appropriate tab below to view additional details:

External database links:

PubChem CID:1146
CHEBI ID:18139
HMDB ID:HMDB0000906
KEGG ID:C00565
Chemspider ID:1114
METLIN ID:3772
BMRB ID:bmse000224
NP-MRD ID(NMR):NP0000850
EPA CompTox DB:DTXCID106238
Plant Metabolite Hub(Pmhub):MS000013594
PhytoHub ID:PHUB000786

Calculated physicochemical properties (?):

Heavy Atoms: 4  
Rings: 0  
Aromatic Rings: 0  
Rotatable Bonds: 0  
van der Waals Molecular volume: 71.46 Å3 molecule-1  
Toplogical Polar Sufrace Area: 3.24 Å2 molecule-1  
Hydrogen Bond Donors: 0  
Hydrogen Bond Acceptors: 1  
logP: 0.18  
Molar Refractivity: 19.61  
Fraction sp3 Carbons: 1.00  
sp3 Carbons: 3  

Human Pathway links:

REACTOME pathways containing this metabolite

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y
NPClassifier classification: "NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products", Kim HW, Wang M, Leber CA, Nothias LF, Reher R, Kang KB, van der Hooft JJJ, Dorrestein PC, Gerwick WH and Cottrell GW. J Nat Prod. 2021 Nov 26;84(11):2795-2807.DOI: 10.1021/acs.jnatprod.1c00399.

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