Metabolomics Structure Database

 
MW REGNO: 67925
Common Name:NSC 370273
Systematic Name:(1R)-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydropyran-2-yl]oxycyclopent-2-ene-1-carbonitrile
Synonyms:Deidaclin; AC1L2K5M; AC1Q4Q3T [PubChem Synonyms]
Exact Mass:
271.1056 (neutral)    Calculate m/z:
Formula:C12H17NO6
InChIKey:HBCFZAXOSTUEHA-ZSOJELSESA-N
ClassyFire superclass:Organic oxygen compounds [C0004603]
ClassyFire class:Organooxygen compounds [C0000323]
ClassyFire subclass:Carbohydrates and carbohydrate conjugates [C0000011]
ClassyFire direct parent:Cyanogenic glycosides [C0002365]
SMILES:C1=C[C@](CC1)(C#N)O[C@H]1[C@@H]([C@H]([C@@H]([C@@H](CO)O1)O)O)O
Studies:Available studies(via PubChem CID)

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External database links:

PubChem CID:73604
KEGG ID:C08329
Plant Metabolite Hub(Pmhub):MS000019828

Calculated physicochemical properties (?):

Heavy Atoms: 19  
Rings: 2  
Aromatic Rings: 0  
Rotatable Bonds: 3  
van der Waals Molecular volume: 247.26 Å3 molecule-1  
Toplogical Polar Sufrace Area: 125.24 Å2 molecule-1  
Hydrogen Bond Donors: 4  
Hydrogen Bond Acceptors: 7  
logP: 0.42  
Molar Refractivity: 65.13  
Fraction sp3 Carbons: 0.75  
sp3 Carbons: 9  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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