Metabolomics Structure Database

MDLMOL SDF CSV TSV

MW REGNO:	61671
Common Name:	Tricoumaroyl spermidine
Systematic Name:	(2E)-3-(4-hydroxyphenyl)-N-(4-{[(2E)-3-(4-hydroxyphenyl)prop-2-enoyl]amino}butyl)-N-(3-{[(2E)-3-(4-hydroxyphenyl)prop-2-enoyl]amino}propyl)prop-2-enamide
Synonyms:	N(1),N(5),N(10)-tri-(4-coumaroyl)spermidine; N(1),N(5),N(10)-tri-[(E)-p-coumaroyl]spermidine; N(1),N(5),N(10)-tricoumaroyl spermidine; N(1),N(5),N(10)-tricoumaroylspermidine [PubChem Synonyms]
Exact Mass:	583.2682 (neutral)    Calculate m/z: (Choose adduct) [M+H]+ [M+H-H2O]+ [M.]+ [M+2H]2+ [M+3H]3+ [M+4H]4+ [M+K]+ [M+2K]2+ [M-H+2K]+ [M+Na]+ [M+2Na]2+ [M-H+2Na]+ [M+Li]+ [M+2Li]2+ [M+NH4]+ [M-H]- [M-2H]2- [M-3H]3- [M-4H]4- [M+Cl]- [M+OAc]- [M+HCOO]- M(neutral)
Formula:	C34H37N3O6
InChIKey:	PFDVWJCSCYDRMZ-AUCPOXKISA-N
ClassyFire superclass:	Phenylpropanoids and polyketides
ClassyFire class:	Cinnamic acids and derivatives
ClassyFire subclass:	Hydroxycinnamic acids and derivatives
ClassyFire direct parent:	Coumaric acids and derivatives
Massbank MS spectra:	View MS spectra
SMILES:	C(CCN(CCCNC(=O)/C=C/c1ccc(cc1)O)C(=O)/C=C/c1ccc(cc1)O)CNC(=O)/C=C/c1ccc(cc1)O
Studies:	Available studies(via PubChem CID)

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All Database Links Calculated Properties Human Pathways

Calculated physicochemical properties (?):

Heavy Atoms:	43
Rings:	3
Aromatic Rings:	3
Rotatable Bonds:	15
van der Waals Molecular volume:	573.12 Å3 molecule-1
Toplogical Polar Sufrace Area:	139.20 Å2 molecule-1
Hydrogen Bond Donors:	5
Hydrogen Bond Acceptors:	7
logP:	5.61
Molar Refractivity:	169.83
Fraction sp3 Carbons:	0.21
sp3 Carbons:	7

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y
NPClassifier classification: "NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products", Kim HW, Wang M, Leber CA, Nothias LF, Reher R, Kang KB, van der Hooft JJJ, Dorrestein PC, Gerwick WH and Cottrell GW. J Nat Prod. 2021 Nov 26;84(11):2795-2807.DOI: 10.1021/acs.jnatprod.1c00399.