ST000083 A Multi-Omic View of Host-Pathogen-Commensal Interplay in Salmonella-Mediated Intestinal Infection
List of human metabolic pathways and metabolites (REACTOME)

Pathway name (# of metabolites detected in study)Reactome pathway
Activation of AMPA receptors (1) REACT_18338
Activation of Ca-permeable Kainate Receptor (1) REACT_21346
Activation of Na-permeable Kainate Receptors (1) REACT_21343
Aflatoxin activation and detoxification (1) REACT_228214
Agmatine biosynthesis (1) REACT_14800
Amino acid synthesis and interconversion (transamination) (1) REACT_238
Amino acid transport across the plasma membrane (2) REACT_13796
Antigen Presentation: Folding, assembly and peptide loading of class I MHC (2) REACT_75795
Antigen processing: Ubiquitination & Proteasome degradation (2) REACT_75842
Astrocytic Glutamate-Glutamine Uptake And Metabolism (1) REACT_13639
Branched-chain amino acid catabolism (1) REACT_197
Class C/3 (Metabotropic glutamate/pheromone receptors) (1) REACT_18319
Cleavage of the damaged purine (1) REACT_1729
CREB phosphorylation through the activation of CaMKII (1) REACT_20642
Cross-presentation of soluble exogenous antigens (endosomes) (2) REACT_111056
Cytosolic tRNA aminoacylation (2) REACT_15306
Degradation of GABA (1) REACT_23964
Endosomal/Vacuolar pathway (2) REACT_111168
EPHB-mediated forward signaling (1) REACT_228085
ER-Phagosome pathway (2) REACT_111178
GABA synthesis (1) REACT_24020
G alpha (i) signalling events (1) REACT_19231
G alpha (q) signalling events (1) REACT_18283
Gluconeogenesis (1) REACT_1520
Glutamate Neurotransmitter Release Cycle (1) REACT_12591
Glutathione synthesis and recycling (2) REACT_6960
Histidine catabolism (2) REACT_1249
Inositol transporters (1) REACT_19188
Lysine catabolism (1) REACT_1298
Metabolism of folate and pterines (1) REACT_11167
Mitochondrial tRNA aminoacylation (2) REACT_15302
Na+/Cl- dependent neurotransmitter transporters (1) REACT_20506
Nicotinate metabolism (1) REACT_11088
Organic anion transporters (1) REACT_19372
Passive transport by Aquaporins (1) REACT_23826
Phenylalanine and tyrosine catabolism (1) REACT_1786
Presynaptic function of Kainate receptors (1) REACT_21254
Proline catabolism (1) REACT_1002
Proton/oligonucleotide cotransporters (2) REACT_19328
Purine catabolism (1) REACT_2086
Purine ribonucleoside monophosphate biosynthesis (1) REACT_1776
Purine salvage (1) REACT_1923
Pyrimidine biosynthesis (1) REACT_21376
Ras activation uopn Ca2+ infux through NMDA receptor (1) REACT_20546
Serine biosynthesis (1) REACT_115789
Sulfur amino acid metabolism (1) REACT_115639
Synthesis and interconversion of nucleotide di- and triphosphates (1) REACT_21330
Synthesis of IP2, IP, and Ins in the cytosol (1) REACT_150352
Synthesis of Leukotrienes (LT) and Eoxins (EX) (1) REACT_150420
Synthesis of PI (1) REACT_121000
Synthesis of UDP-N-acetyl-glucosamine (1) REACT_22394
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds (1) REACT_19305
Transport of inorganic cations/anions and amino acids/oligopeptides (1) REACT_19397
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane (1) REACT_1206
Tryptophan catabolism (1) REACT_916
Unblocking of NMDA receptor, glutamate binding and activation (1) REACT_20594
Urea cycle (2) REACT_847
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