Data for ST003726   

(Analysis AN006112): Average values per metabolite and experimental factor (Units:Integrative area under chromatographic peak)

Metabolite structureAll dataF1F2F3F4F5F6F7F8F9F10F11F12F13
1,2^-O-dimethyladenosine
4.00 152.50 12.75 9.00 6.00 15.25 116.00 10.50 573.33 4.00 36.25 4.50 181.33
1-methyladenosine
7536.50 2421310.00 38979.25 3861035.67 19374747.00 238957.00 5964572.50 93036.50 15766132.00 30098.25 6531642.75 36061.00 7669834.67
1-methylguanosine
774274.50 61543.00 537.50 127228.33 2782670.00 1936.25 89886.25 342.00 225605.83 983.25 189435.00 1241.00 171555.67
1-methylinosine
16.00 5476.00 2663.75 254777.83 148300.00 12929.75 278407.25 2146.50 574881.50 1657.25 337157.75 1840.00 249614.33
1-methylpseudouridine_1
63.50 388.50 526.25 21108.17 620.00 57.25 114.75 101.50 308.67 317.00 7806.50 43.00 4011.67
1-methylpseudouridine_2
13.50 184.50 332.00 16748.33 515.00 27.50 90.50 60.00 228.83 26.25 6371.00 12.00 3276.33
2,8-dimethyladenosine
6.00 1.00 6.00 334.33 6.00 6.00 12.00 5.00 5.00 4.75 5.50 19.50 22.33
2-methyladenosine
2245826.50 58.00 34.00 19.17 111.00 55.25 362.00 70.00 71.33 81.50 54.75 67.50 80.67
2-methylthio-N6-isopentenyladenosine_1
439432.00 62699.50 72.50 62.50 147.50 54.75 43.75 42.00 59.50 136.25 120.00 51.50 42.00
2-methylthio-N6-isopentenyladenosine_2
415731.50 59763.50 3036.75 1903.67 137.00 3621.00 3277.25 3853.00 3721.50 99.75 82.00 130.00 3468.50
2-methylthio-N6-methyladenosine
4.50 5.00 4.00 4.75 8.00 2.00 3.00 3.50 7.40 4.33 3.50 7.00 3.33
2^-O-methyladenosine
20307.50 11027966.50 264.00 382.67 7757227.00 6835.50 256760.25 4886.50 747300.33 3658.75 409516.00 1368.50 204715.00
2^-O-methylcytidine
234638.00 2459175.50 7477.75 456211.00 1520764.50 18451.50 471135.50 11614.00 1890241.00 9955.00 784412.00 36645.00 683355.00
2^-O-methylguanosine
214565.50 1639472.00 2608.00 87374.17 1112434.00 10093.25 257411.75 5609.50 500360.33 8315.00 701795.25 6742.00 367555.67
2^-O-methylinosine_1
13.50 14.50 7.50 5.83 17.00 6.75 13.50 4.50 10.83 11.00 26.75 24.50 12.00
2^-O-methylinosine_2
36.00 12.50 10.75 20.33 14.00 4.25 7.00 6.50 40.83 11.75 40.75 22.50 22.67
2^-O-methyluridine
24542.00 195218.00 223.50 10307.50 109063.00 1105.00 41649.75 852.00 75591.50 1485.75 73750.00 539.00 36161.33
2-thio-2^-O-methyluridine
9.50 19.00 19.00 8.33 16.50 31.25 544.50 28.00 645.00 27.75 12.25 12.50 15.67
2-thiocytidine
10823.50 7.00 270.25 120431.17 6141.50 7.75 11.00 4.50 581.67 413.00 110383.50 914.00 88117.00
2-thiouridine
430.50 34.00 52.00 1094.33 10.50 437.00 9200.75 14.00 6391.33 10.50 20722.50 5.50 10842.67
3,2^-O-dimethyluridine
4.00 4.50 42.75 516.17 12.50 15.50 17.50 4.50 5.17 16.25 15.25 5.00 10.67
3-(3-amino-3-carboxypropyl)uridine
874.00 184.50 304.00 188.17 30.00 95.50 259.75 489.00 346.50 360.50 555.00 13.00 288.33
3-methylcytidine
1081.00 49920.00 6.00 17.20 1688928.50 81.00 737.50 1004.50 9466.67 41.33 140.50 17.50 563.33
3-methylpseudouridine_1
20990.00 42.00 21.50 2512.33 41.00 121.00 3384.50 33.00 12.50 145.25 4842.75 35.50 2206.67
3-methylpseudouridine_2
9813.00 25.50 790.75 8600.67 14.00 3722.50 95181.50 10.00 17.33 27.75 2436.25 9.00 1116.33
3-methyluridine
29322.50 16596.00 4.75 8.60 31825.50 94.00 4636.75 8.50 3297.67 16.75 7573.00 13.50 3454.67
4-demethylwyosine
4.50 30.50 432.25 24534.67 587.50 295.75 8781.50 28.00 4048.50 - - 4.50 5245.33
4-thiouridine
6409.50 6.00 44.50 9366.67 17.50 322.75 722.50 77.50 7232.83 85.50 21147.00 62.50 11155.67
5,2^-O-dimethylcytidine
152144.00 253.50 50.75 35.83 12.50 165.25 4385.50 63.50 21476.83 8.50 428.50 26.50 1173.67
5,2^-O-dimethyluridine
28.00 1081.00 399.00 36438.00 2.00 1532.00 99673.00 5.00 13.50 10.00 8.75 3.50 2.67
5-carbamoylmethyluridine_1
12.00 212.50 5.00 1561.17 19628.50 12.75 8.50 12.50 18.83 356.00 9.75 3.00 14.67
5-carbamoylmethyluridine_2
10.00 201.50 2.00 146.00 17571.00 1.75 2.00 2.50 1.83 11.50 7.50 1.50 15.33
5-carboxycytidine
692.50 3809.00 16501.25 17766.00 3550.00 13962.75 14483.50 19747.50 12314.33 14605.00 17587.00 - 11804.00
5-carboxymethylaminomethyluridine_1
20.00 12.50 12.50 202.00 13.50 19.75 10.00 8.00 24.50 24.75 268.00 25.50 355.67
5-carboxymethylaminomethyluridine_2
41.50 6.50 3.25 2.83 2.00 3.50 2.75 1.50 1.67 1.50 1.33 1.50 3.00
5-carboxymethylaminomethyluridine_3
34.50 7.50 2.50 45.67 12.50 22.25 7.75 9.00 6.67 5.00 40.75 10.50 61.33
5-carboxymethyluridine_1
82.00 130.50 14.75 62.83 165.50 12.00 24.25 51.00 35.67 7.50 58.75 77.00 51.33
5-carboxymethyluridine_2
148.50 30.50 3895.00 90696.67 127.50 11278.50 308043.50 32.00 45.33 11.50 9.50 28.50 23.67
5-formylcytidine
3197.00 629.50 781.50 918.67 9.00 103.75 407.00 578.00 1065.67 677.75 1499.25 5.00 901.67
5-hydroxymethylcytidine
60.00 178.00 24.25 5.50 13.50 22.50 151.75 9.00 176.67 8.00 24.33 10.00 84.00
5-hydroxyuridine
377.50 46.50 24.50 415.00 26.00 51.50 67.50 10.00 30.83 66.00 33.75 7.50 8.00
5-methoxycarbonylmethyl-2^-O-methyluridine
11.50 16.50 6.50 11.83 18.50 9.50 201.50 11.50 2730.00 5.25 6.75 24.50 11.00
5-methoxycarbonylmethyl-2-thiouridine_1
13.50 378.50 16.00 11.17 50448.00 38.75 971.25 44.00 962.17 21.25 12.50 67.00 54.33
5-methoxycarbonylmethyl-2-thiouridine_2
29.00 755.00 10.50 18.83 99041.00 39.25 1641.75 15.00 1731.67 24.00 23.25 360.50 26.67
5-methoxycarbonylmethyluridine_1
24.00 9.50 23.00 25.83 19910.00 29.00 44.50 37.00 372.00 37.00 40.50 9.00 188.67
5-methoxycarbonylmethyluridine_2
15.50 36.00 42.00 30.00 26543.00 11.25 34.25 41.50 468.00 56.25 131.00 13.00 31.33
5-methoxyuridine
7.50 13.00 138.50 14.33 12.50 47.75 17.25 54.00 42.17 99.25 313.75 1.50 155.00
5-methyl-2-thiouridine
23.50 23.50 114.50 46.33 74.50 1453.25 19925.50 129.50 187.00 167.00 35127.00 103.00 25310.33
5-methylaminomethyl-2-thiouridine_1
9145.00 6.50 47.75 4996.50 3.00 8.00 27.00 - - 4.00 78.33 4.00 -
5-methylaminomethyl-2-thiouridine_2
13257.00 8.00 49.50 7231.83 8.50 4.67 5.00 2.00 3.67 10.25 6.50 6.50 8.33
5-methylcytidine
248270.00 132738.50 1932.00 38642.67 1023830.00 7327.75 176333.00 3137.50 593662.17 7773.75 532229.50 14246.50 425127.67
5-methyldihydrouridine
123.50 83.50 12.00 6108.50 355.00 2.25 30.00 40.50 19.00 42.75 6165.75 4.50 4822.00
5-methyluridine
24220.00 850.50 575.00 2268.50 67960.50 1286.75 19182.00 46.00 162.00 410.75 2628.00 26.50 1495.33
7-methylguanosine
6298963.50 1196230.00 150.00 167.50 7738011.50 1504.50 24075.25 10655.50 160683.67 3901.75 183483.25 5691.50 211481.33
8-methyladenosine
3501492.50 2294427.50 834.25 12856.50 110862.00 2065.50 44762.75 6505.00 218003.17 14422.00 39616.75 2216.00 26310.67
adenosine
88475234.00 72850172.00 27359492.00 25624222.67 81888492.00 9608302.25 9743094.75 15408146.50 17787818.33 17605165.00 18148218.75 6835070.00 14135864.33
cytidine
10182938.00 10515510.50 1989246.00 3422004.33 8999536.50 1078768.75 2035556.50 2015038.00 3948895.17 1834187.25 3623716.00 1210301.50 3281069.33
dihydrouridine
29493.50 1929.50 76.00 83.00 198729.50 88.25 58.75 136.50 48.50 694.00 101.50 204.50 52.00
guanosine
30982233.00 27847721.00 7092760.75 8674706.67 24781082.00 2443318.75 4937081.50 4098977.50 8939770.17 5734708.00 11612036.00 897071.00 7541388.00
inosine
5149.00 23597.00 858.25 2344.67 459040.50 473.00 830.25 1025.50 1254.67 1576.75 8884.00 186.50 564.67
isowyosine
7.50 14.50 256.50 12336.83 9.50 654.50 13621.75 369.50 63456.50 - - 11.00 1915.00
N2,2^-O-dimethylguanosine
2.50 5.50 850.00 9105.00 2.50 3866.50 97932.75 3.00 329.67 276.25 33525.50 103.50 22867.67
N2,7-dimethylguanosine_1
36.50 18.00 4.75 3.80 157.50 159.75 462.75 22.00 23.00 26.50 4962.25 4306.00 4272.67
N2,7-dimethylguanosine_2
13.50 3.00 9.00 1033.25 17.00 8.50 4.00 3.00 7.67 46.25 8206.75 - 6898.67
N2-methylguanosine
497043.50 35068.00 319.00 60809.33 592451.00 5929.50 125442.75 948.50 299639.00 813.50 122108.50 428.50 80456.33
N2,N2,7-trimethylguanosine_1
9.00 200.00 58.00 52.17 117.50 38.00 40.25 9.50 37.00 106.50 6.75 906.50 11.00
N2,N2,7-trimethylguanosine_2
7.50 329.50 115.75 18408.75 133.00 1541.50 52713.25 1.50 38.33 2.50 5.75 - 8.33
N2,N2-dimethylguanosine
486.00 21504.50 1022.00 202692.33 1878129.50 6752.50 204001.75 2410.00 777068.50 3092.25 314271.00 1041.00 175074.67
N4,2^-O-dimethylcytidine
152463.50 280.50 8.00 11.83 6.50 118.00 4373.75 72.00 21401.33 16.00 403.50 9.00 1216.33
N4-acetyl-2^-O-methylcytidine_1
7.00 4.50 2.00 2.40 9.50 53.75 1240.75 10.00 3655.83 15.50 6760.75 65.00 8090.33
N4-acetyl-2^-O-methylcytidine_2
3.00 11.50 3.00 4.00 8.50 126.25 3121.25 57.00 17025.17 63.50 17808.50 19.00 39363.67
N4-acetylcytidine_1
742.00 112018.50 2197.75 1556.83 304806.00 4535.00 110656.50 2421.00 269333.50 19298.50 924369.50 18465.50 693528.67
N4-acetylcytidine_2
655.50 100103.50 47.25 63.60 272880.00 3900.00 100722.00 2308.50 248650.33 18276.50 823255.50 17554.50 634273.67
N4-methylcytidine_1
255334.50 135542.00 1971.25 39515.33 1048438.50 7450.25 241826.67 3145.50 607932.33 8002.00 543454.25 14640.50 436343.67
N4-methylcytidine_2
34.00 139.50 472.25 2174.33 4.00 1309.00 19156.75 4.00 10.67 - - 9.00 8.00
N4,N4,2^-O-trimethylcytidine
8.00 17.50 81.75 53.33 15.00 14.50 26.50 14.50 209.67 7.75 8.00 5.50 54.00
N4,N4-dimethylcytidine
23.00 19.50 24.25 15.67 32.00 18.25 35.25 7.00 11.33 78.25 74057.50 1144.50 58641.33
N6,2^-O-dimethyladenosine
159.50 75242.00 15.00 91.33 107.50 13.50 20.75 11.00 118.83 61.00 193.00 2654.50 95.00
N6-acetyladenosine_1
8.00 12.50 43.25 18.17 20.50 982.00 371.25 77.00 1077.33 33.50 88.00 21.00 121.33
N6-acetyladenosine_2
5.00 15.50 24.50 11.17 42.00 12.75 14.50 16.00 68.17 14.75 50.50 17.00 50.00
N6-(cis-hydroxyisopentenyl)adenosine
6.50 12.00 4.75 3.67 15.50 3.25 3.50 3.00 17.83 10.50 8.25 4.50 3.00
N6-formyladenosine_1
15.50 7.50 20.75 1221.50 8.00 12.75 15.50 20.50 27.80 14.75 11.75 5.50 18.00
N6-formyladenosine_2
18.50 76.50 16.75 1025.33 26.00 9.25 11.00 12.50 19.33 2.75 74.75 180.00 56.33
N6-hydroxymethyladenosine_1
181.50 112.00 45.25 47.83 182.50 13.50 36.00 27.00 150.50 60.25 94.25 11.50 94.00
N6-hydroxymethyladenosine_2
3147.00 1870.50 533.00 621.50 2827.00 142.00 230.25 223.50 2321.67 804.75 1151.50 21.00 1072.00
N6-isopentenyladenosine_1
13697.50 10882.50 117.75 509.17 1503768.50 115.00 102.75 99.50 338.17 235.50 134.75 10700.50 306.50
N6-isopentenyladenosine_2
15508.50 12116.50 124.00 560.00 1699859.50 126.25 126.25 100.00 369.67 257.50 147.25 10903.50 355.50
N6-methyladenosine
3482031.50 2304666.50 874.25 12961.33 111434.50 2019.00 44707.50 6513.50 218072.83 14451.75 39621.50 2361.50 26398.67
N6-methyl-N6-threonylcarbamoyladenosine_1
442.00 25.50 4743.00 456915.80 189.00 6859.25 69182.25 8.50 26.67 60.75 118.50 4.50 68.33
N6-methyl-N6-threonylcarbamoyladenosine_2
627.00 91.50 2.50 1.17 2.50 5.00 1.75 5.00 3.67 2.25 2.00 1.50 2.50
N6,N6,2^-O-trimethyladenosine
2.00 1.50 3.50 2.67 7.00 2.75 3.25 4.00 2.33 4.25 1.00 1.00 3.67
N6,N6-dimethyladenosine
5310991.00 3200505.50 5823.50 1234343.67 3975300.50 5879.25 111660.75 20411.00 588508.67 4895.75 1034146.25 75984.50 1005798.00
N6-threonylcarbamoyladenosine_1
2680.00 637.00 68.75 2394.67 33534.50 188.75 8233.25 57.50 17762.00 22.75 269.50 251.00 1571.00
N6-threonylcarbamoyladenosine_2
4148.00 973.50 106.25 3605.00 50531.50 280.75 12167.50 88.00 25683.50 38.50 359.00 490.50 2255.00
O6-methylguanine
76.00 35.00 16.75 14.33 40.50 16.50 10.25 13.50 34.17 25.75 18.75 54.50 31.33
pseudouridine
70482.50 241422.50 33.75 21362.33 271952.00 91.25 9383.50 209.00 40970.50 74.00 43663.00 183.00 40315.33
uridine
3881369.50 2805669.00 1824626.75 1279723.33 4012981.00 628612.00 641832.75 1241944.00 1103040.33 705664.25 1103603.75 82020.00 732691.67
uridine 5-oxyacetic acid methyl ester_1
12211.50 23.00 52.75 60.83 14.50 52.75 38.50 14.50 331.67 28.25 292.50 13.50 160.00
uridine 5-oxyacetic acid methyl ester_2
10719.50 13.00 17.75 8.67 6.50 10.25 21.00 5.50 9.00 4.00 11.00 28.50 13.33
uridine 5-oxyacetic acid methyl ester_3
41523.50 26.00 39.00 10.83 17.00 74.25 8.75 46.00 25.00 31.25 424.75 11.50 15.67

Factors:

F1Species:Escherichia coli | Sample source:Total RNA
F2Species:Homo sapiens | Sample source:Total RNA
F3Species:Methanococcus maripaludis | Sample source:rRNA_depletion
F4Species:Methanococcus maripaludis | Sample source:Total RNA
F5Species:Saccharomyces cerevisiae | Sample source:Total RNA
F6Species:Sulfolobus acidocaldarius | Sample source:rRNA_depletion
F7Species:Sulfolobus acidocaldarius | Sample source:Total RNA
F8Species:Sulfolobus islandicus | Sample source:rRNA_depletion
F9Species:Sulfolobus islandicus | Sample source:Total RNA
F10Species:Thermococcus kodakarensis | Sample source:rRNA_depletion
F11Species:Thermococcus kodakarensis | Sample source:Total RNA
F12Species:Thermococcus sp. AM4 | Sample source:rRNA_depletion
F13Species:Thermococcus sp. AM4 | Sample source:Total RNA
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