Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002457)

(Analysis AN004009)

Metabolite	Structure	F1	F2	F3
Mannitol/Sorbitol	ME581226	0.23	0.32	2.61
Cytidine 2^,3^-Cyclic Phosphate	ME581139	0.47	1.72	0.05
Serotonin	ME581305	1.22	0.39	1.64
Lauric acid	ME581215	1.84	0.62	0.78
Glyceraldehyde 3-phosphate	ME581185	1.65	0.70	0.84
Thymidine-Monophosphate (TMP)	ME581324	1.70	0.61	0.92
2-Acetamido-2-Deoxy-Beta-D-Glucosylamine	ME581061	0.77	0.85	1.41
Cystine	ME581137	0.67	0.84	1.51
Galacturonate	ME581171	0.24	1.05	1.59
Phenylpyruvate	ME581279	0.34	0.69	1.88
Xanthosine-Monophosphate	ME581349	0.18	0.87	1.79
N-Acetylneuraminate	ME581250	0.30	1.25	1.26
Guanidinosuccinate	ME581192	0.23	1.22	1.28
N-Amidino-L-Aspartate	ME581255	0.23	1.22	1.28
Tartrate	ME581317	0.56	1.15	1.17
Dimethylarginine	ME581159	0.66	1.19	1.04
Propionyl-carnitine	ME581286	0.61	1.20	1.07
4-Acetamidobutanoate	ME581078	0.59	1.19	1.10
Deoxycytidine-Diphosphate (dCDP)	ME581146	0.60	1.16	1.12
Corticosterone	ME581132	0.51	1.24	1.04
Urocanate	ME581346	0.55	1.27	1.02
Gulonolactone	ME581198	0.47	1.26	1.10
N-Alpha-Acetyllysine	ME581254	0.43	1.25	1.15
O-Succinyl-Homoserine	ME581270	0.47	1.14	1.26
3-(4-Hydroxyphenyl)Pyruvate	ME581071	0.44	1.09	1.36
5-Hydroxylysine	ME581084	0.46	1.08	1.36
Mevalonate	ME581232	0.74	0.95	1.29
gamma-Glutamylcysteine	ME581172	0.62	1.00	1.34
N-Acetylglucosamine	ME581244	0.55	1.10	1.25
Deoxyuridine	ME581152	0.63	1.07	1.22
Oxoglutarate	ME581271	0.62	1.05	1.26
Xanthurenate	ME581350	0.57	1.63	0.52
Quinoline	ME581293	0.57	1.48	0.72
Lignoceric acid	ME581220	0.63	1.41	0.76
N-Acetylputrescine	ME581252	0.67	1.43	0.70
N-Acetylasparagine	ME581241	0.52	1.35	0.94
N-Formyl-L-Methionine	ME581257	0.48	1.37	0.95
Citrulline	ME581130	0.64	1.27	0.95
Phosphoenolpyruvate	ME581281	0.63	1.25	0.98
2-Phosphoglycerate	ME581069	0.63	1.31	0.90
Cystathionine	ME581136	0.61	1.32	0.90
2-Aminoadipate	ME581062	0.60	1.35	0.86
Nervonic acid	ME581256	0.57	1.35	0.90
Homocysteine	ME581202	0.69	1.35	0.79
O-Phosphoserine	ME581266	0.75	1.34	0.74
Phosphoserine	ME581283	0.75	1.34	0.74
Nicotinamide adenine dinucleotide phosphate (NADP+)	ME581259	0.76	1.28	0.82
Xanthosine	ME581348	0.69	1.28	0.90
Deoxycytidine	ME581144	0.73	1.25	0.89
N-Acetylmethionine	ME581249	0.73	1.27	0.87
N-Acetyl-L-glutamine	ME581248	0.19	1.60	0.88
Phosphocreatine	ME581280	0.43	1.56	0.72
Glutarylcarnitine	ME581182	0.39	1.42	0.96
N-Acetylleucine	ME581247	0.36	1.45	0.95
Ophthalmate	ME581267	0.43	1.44	0.90
Behenic acid	ME581113	0.40	1.46	0.88
Kynurenate	ME581211	0.41	1.47	0.86
6-Carboxyhexanoate	ME581086	1.22	1.14	0.56
Succinylcysteine	ME581315	0.78	1.10	1.06
Methylarginine	ME581230	0.80	1.08	1.07
Allantoin	ME581102	0.78	1.08	1.08
N-Acetylphenylalanine	ME581251	0.79	1.07	1.09
Isoleucine	ME581210	0.76	1.07	1.11
Ureidopropionate	ME581336	0.72	1.09	1.12
3-Methyl-L-Histidine	ME581077	0.75	1.10	1.08
Dethiobiotin	ME581153	0.73	1.11	1.09
Glutarate	ME581181	0.73	1.10	1.10
Oxoproline	ME581272	0.70	1.02	1.23
Trans-4-Hydroxy-L-Proline	ME581326	0.69	1.09	1.15
Cis-4-Hydroxy-D-Proline	ME581124	0.69	1.09	1.15
Hydroxyproline	ME581204	0.69	1.09	1.15
Retinoate	ME581295	0.73	1.06	1.16
Succinyladenosine	ME581313	0.71	1.05	1.18
cis-Aconitate	ME581127	0.82	1.15	0.96
Sphingomyelin	ME581308	0.81	1.16	0.95
Lauroylcarnitine	ME581216	0.80	1.13	0.99
Xylitol/Ribitol/Arabitol	ME581352	0.80	1.13	1.00
Aminoisobutanoate	ME581106	0.80	1.12	1.02
N(6)-Methyllysine	ME581238	0.79	1.12	1.01
2-Aminoisobutyrate	ME581063	0.77	1.14	1.00
N-Acetylglycine	ME581246	0.77	1.15	1.00
Creatinine	ME581134	0.75	1.16	1.00
Guadinoacetate	ME581190	0.75	1.16	1.01
Guanidinoacetate	ME581191	0.75	1.16	1.01
Beta-Glycerophosphate	ME581115	0.75	1.18	0.97
Glycerol 3-Phosphate	ME581187	0.75	1.18	0.97
Beta-Nicotinamide Adenine Dinucleotide	ME581118	0.78	1.17	0.97
Thiamine Pyrophosphate	ME581320	0.78	1.17	0.95
Aspartate	ME581112	0.83	1.17	0.91
Stearic acid	ME581311	0.86	1.15	0.91
Myristoyl-carnitine	ME581237	0.87	1.13	0.94
Palmitate	ME581273	0.90	1.13	0.91
Thymidine	ME581323	0.77	1.20	0.92
Glutamine	ME581179	0.79	1.21	0.90
Nicotinamide adenine dinucleotide reduced (NADH)	ME581260	0.81	1.19	0.90
Histamine	ME581200	0.85	1.21	0.84
Tryptophan	ME581331	0.80	1.24	0.85
beta-Hydroxyisovaleric acid	ME581116	0.99	0.88	1.18
Uridine	ME581337	0.97	0.90	1.17
Deoxyribose	ME581151	0.91	0.92	1.20
Histidine	ME581201	0.94	0.90	1.19
Leucine	ME581219	0.86	0.96	1.17
3-Hydroxymethylglutarate	ME581074	0.88	0.95	1.17
Citicoline	ME581128	0.89	0.94	1.18
Omega-Hydroxydodecanoate	ME581264	0.82	0.98	1.18
4-Imidazoleacetate	ME581080	0.79	0.97	1.22
Acetylcholine	ME581089	0.78	0.97	1.20
Myo-Inositol	ME581234	0.95	1.02	1.02
Trigonelline	ME581329	0.95	1.02	1.01
3-Hydroxybutanoate	ME581072	0.92	1.04	1.01
Carnitine	ME581120	0.94	1.04	1.01
Phenylalanine	ME581278	0.89	1.06	1.01
Glutamate	ME581177	0.90	1.05	1.01
S-Adenosylmethionine	ME581301	0.90	1.06	1.01
Argininosuccinate	ME581110	0.88	1.07	1.01
Alanine	ME581100	0.89	1.07	0.99
all-cis-4,7,10,13,16-Docosapentaenoic acid	ME581103	0.90	1.07	0.99
Thymine	ME581325	0.90	1.07	1.00
Threonine	ME581322	0.89	1.07	1.00
Allothreonine	ME581104	0.89	1.07	1.00
Homoserine	ME581203	0.89	1.07	1.00
Creatine	ME581133	0.91	1.06	0.99
N6-(Delta2-Isopentenyl)-Adenine	ME581239	0.92	1.06	0.98
Uridine 5^-Diphosphate (UDP)	ME581338	0.93	1.07	0.96
Docosahexaenoic Acid	ME581161	0.94	1.06	0.98
Quinolinate	ME581292	0.93	1.06	0.97
1-Aminocyclopropanecarboxylate	ME581058	0.85	1.09	1.00
Methionine	ME581227	0.86	1.07	1.02
Adenine	ME581091	0.84	1.09	1.02
Pantothenate	ME581275	0.84	1.08	1.03
4-Guanidinobutanoate	ME581079	0.87	1.10	0.98
5-Methylcytosine	ME581085	0.84	1.12	0.98
Guanosine Diphosphate (GDP)	ME581195	0.85	1.11	0.97
Acetyl-L-carnitine	ME581090	0.90	1.08	0.97
cis-7,10,13,16-Docosatetraenoic acid	ME581126	0.90	1.10	0.95
2-Aminophenol	ME581064	0.88	1.10	0.96
Arginine	ME581109	0.88	1.11	0.95
Urate	ME581335	0.87	0.98	1.14
Beta-Alanine	ME581114	0.86	0.99	1.14
D-Sedoheptulose	ME581164	0.86	1.00	1.13
N-Metyl-Alanine	ME581261	0.86	1.00	1.13
Ornithine	ME581268	0.88	1.01	1.10
Kynurenine	ME581212	0.85	1.02	1.10
Proline	ME581285	0.86	1.02	1.10
Ribose	ME581298	0.80	1.04	1.12
Citrate	ME581129	0.87	1.05	1.05
Glucose 6-Phosphate	ME581175	0.86	1.05	1.05
Pipecolate	ME581284	0.83	1.04	1.09
3-hydroxybutyric acid	ME581073	0.83	1.04	1.10
3-Methyl-2-Oxovalerate	ME581076	0.83	1.04	1.10
Threitol	ME581321	0.83	1.05	1.08
Fructose 6-Phosphate	ME581168	0.85	1.05	1.07
Galactose 1-Phosphate	ME581170	0.84	1.05	1.07
Lysine	ME581224	0.89	1.01	1.08
Sedoheptulose-7-phosphate (D)	ME581303	0.90	1.01	1.08
Alpha-Hydroxyisobutyrate	ME581105	0.91	1.01	1.07
Glycine	ME581188	0.91	1.00	1.08
Serine	ME581304	0.90	1.03	1.05
Tyrosine	ME581332	0.90	1.03	1.04
Succinate	ME581312	0.93	1.02	1.03
Trimethyllysine	ME581330	0.93	1.01	1.05
3-Hydroxyoctanoic acid	ME581075	0.94	0.96	1.11
Glycerol	ME581186	0.94	0.95	1.12
Dimethylglycine	ME581160	0.93	0.99	1.08
Malate	ME581225	0.93	0.97	1.10
Norvaline	ME581262	0.92	0.98	1.10
Valine	ME581347	0.92	0.98	1.10
Myristic acid	ME581235	0.97	0.99	1.04
Asparagine	ME581111	0.96	0.98	1.07
N-Acetylaspartate	ME581242	0.96	0.98	1.06
Rhamnose	ME581296	1.01	0.94	1.07
Eicosapentaenoate	ME581165	0.99	0.95	1.08
N-Acetylserine	ME581253	0.97	0.96	1.09
Adenosine 3^,5^-cyclic monophosphate (cAMP)	ME581093	1.00	1.10	0.86
N-Acetylglutamate	ME581245	1.00	1.10	0.86
Dihydroorotate	ME581157	1.03	1.08	0.86
Glutathione Reduced (GSH)	ME581184	1.04	1.07	0.87
5(Z),8(Z),11(Z)-Eicosatrienoic Acid	ME581082	1.01	1.05	0.92
Coenzyme A	ME581131	1.01	1.03	0.95
FAD (Flavin adenine dinucleotide)	ME581167	1.02	1.02	0.96
9-Decenoic acid	ME581087	1.04	1.04	0.92
Adp-Glucose	ME581098	1.05	1.01	0.94
Cyclic AMP	ME581135	1.04	1.02	0.93
14-Methylhexadecanoic acid	ME581057	0.97	1.04	0.97
Adenosine Diphosphate Ribose	ME581096	0.98	1.08	0.91
Adenosine 5^-Diphosphate (ADP)	ME581094	0.97	1.06	0.95
Deoxyguanosine diphosphate (dGDP)	ME581148	0.97	1.07	0.93
Pentadecanoic acid	ME581276	1.02	0.91	1.11
Adenosine-Monophosphate (AMP)	ME581097	1.04	0.91	1.08
Deoxyguanosine-Monophosphate (dGMP)	ME581150	1.04	0.91	1.08
Pyruvate - IS	ME581291	1.03	0.99	0.99
Sarcosine	ME581302	1.03	0.99	0.99
Taurine	ME581318	1.05	0.99	0.97
Lactate	ME581213	1.05	0.99	0.98
Guanosine Diphosphate Mannose	ME581196	1.04	0.99	0.98
Galactosamine	ME581169	1.04	0.99	0.98
Glucosamine	ME581173	1.04	0.99	0.98
Glucose	ME581174	1.02	0.99	1.00
Methylthioadenosine	ME581231	1.01	0.99	1.01
Hippurate	ME581199	0.99	0.99	1.01
Lactate -IS	ME581214	1.01	1.00	1.00
Glucose-IS	ME581176	0.99	1.00	1.00
Alanine-IS	ME581101	1.00	1.00	1.00
Glycolate	ME581189	1.00	1.00	1.00
2-Methylmaleate	ME581068	0.99	1.02	0.98
Pyridoxal	ME581288	0.97	1.01	1.01
Arachidonic acid	ME581108	0.98	1.01	1.00
Ricinoleic acid	ME581299	0.99	1.01	1.00
L-Cysteic Acid	ME581217	1.00	0.97	1.04
Glutamate -IS	ME581178	1.03	0.98	1.01
Thiamine Monophosphate	ME581319	1.02	0.97	1.02
Methyl Vanillate	ME581229	1.09	0.91	1.05
Palmitoleic acid	ME581274	1.10	0.89	1.06
Uridine Diphosphate-N-Acetylgalactosamine	ME581342	1.09	0.95	0.99
Uridine Diphosphate-N-Acetylglucosamine	ME581343	1.09	0.95	0.99
Trehalose	ME581327	1.05	0.97	1.00
2-Hydroxyhexadecanoic acid	ME581067	1.07	0.96	0.99
N-Acetylalanine	ME581240	1.06	0.96	0.99
Sucrose	ME581316	1.04	0.96	1.02
Deoxycarnitine	ME581143	1.06	0.95	1.02
Orotate	ME581269	1.06	0.95	1.02
Hypotaurine	ME581205	1.05	0.95	1.03
S-Adenosylhomocysteine	ME581300	1.05	0.94	1.03
cis-5-Dodecenoic acid	ME581125	1.08	0.94	1.01
Glutamine - IS	ME581180	1.09	0.93	1.02
AICAR	ME581099	1.08	0.93	1.03
Pentanoate	ME581277	1.08	0.92	1.03
Dihydronicotinamide-adenine dinucleotide phosphate (NADPH)	ME581156	0.82	1.41	0.60
N-Acetylcysteine	ME581243	0.88	1.36	0.60
Docosatrienoic Acid	ME581162	1.00	1.26	0.67
Sphinganine	ME581307	0.91	1.29	0.68
4-Pyridoxate	ME581081	0.95	1.13	0.86
Erucic acid	ME581166	0.93	1.16	0.84
Acetyl CoA	ME581088	0.94	1.15	0.84
Cytidine Diphosphate (CDP)	ME581140	0.94	1.15	0.85
Riboflavin	ME581297	1.01	1.16	0.77
1-Methyladenosine	ME581059	0.98	1.19	0.76
Carnosine	ME581121	0.99	1.18	0.76
Uridine-5-triphosphate (UTP)	ME581345	0.89	1.24	0.77
Arachidic acid	ME581107	0.90	1.20	0.81
Adenosine 5^-triphosphate (ATP)	ME581095	0.92	1.22	0.77
Deoxyguanosine triphosphate (dGTP)	ME581149	0.93	1.20	0.78
L-Dopa (3,4-Dihydroxyphenylalanine)	ME581218	1.40	0.98	0.72
Stachyose	ME581310	1.50	0.90	0.70
Deoxycytidine Monophosphate (dCMP)	ME581145	1.57	0.78	0.81
5-Aminolevulinate	ME581083	1.52	0.83	0.78
Glutathione disulfide (GSSG)	ME581183	1.50	0.83	0.80
Uridine Monophosphate (UMP)	ME581344	1.40	0.83	0.89
Linolenic acid	ME581222	1.41	0.81	0.90
Ximeninic Acid	ME581351	1.41	0.81	0.90
Cytidine Monophosphate (CMP)	ME581141	1.36	0.89	0.84
Raffinose	ME581294	1.35	0.91	0.82
Pyrophosphomevalonate	ME581289	1.15	1.09	0.74
Uridine Diphosphate Glucuronic Acid	ME581340	1.13	1.02	0.85
Inosine	ME581208	1.23	0.80	1.07
D-Ribose 5-Phosphate	ME581163	1.25	0.83	1.02
Inosine-Monophosphate (IMP)	ME581209	1.26	0.83	1.01
2-hydroxy glutarate	ME581066	1.16	0.96	0.91
cis-11-Eicosenoic acid	ME581123	1.13	0.99	0.90
O-Phosphoethanolamine	ME581265	1.10	0.98	0.94
Succinylaminoimidazole carboxamide riboside (SAICAr)	ME581314	1.13	0.95	0.96
Guanosine Monophosphate (GMP)	ME581197	1.13	0.96	0.94
Oleic acid	ME581263	1.14	0.95	0.94
D-Glucosamine 6-phosphate	ME581154	1.22	0.88	0.97
Butyryl-L-carnitine	ME581119	1.19	0.88	1.00
Cytidine	ME581138	1.19	0.86	1.02
CDP-Ethanolamine	ME581122	1.13	0.93	0.99
Nicotinamide	ME581258	1.12	0.93	0.99
Hypoxanthine	ME581206	1.19	0.90	0.97
Guanine	ME581193	1.17	0.92	0.96
Dihydrobiopterin	ME581155	1.16	0.91	0.98
Monoethylmalonate	ME581233	1.16	0.91	0.98
Linoleic acid	ME581221	1.26	0.94	0.85
Uridine Diphosphategalactose	ME581341	1.25	0.94	0.86
Uridine Diphosphate Glucose	ME581339	1.25	0.94	0.86
Betaine	ME581117	1.22	0.95	0.88
Pterin	ME581287	1.22	0.98	0.87
Sn-Glycero-3-Phosphocholine	ME581306	1.23	0.96	0.85
2,4-Dihydroxypteridine	ME581060	1.31	0.88	0.89
Dihydroxyacetone Phosphate (DHAP)	ME581158	1.27	0.89	0.92
Phosphorylcholine	ME581282	1.27	0.87	0.94
3-(2-Hydroxyphenyl)Propanoate	ME581070	1.00	0.74	1.36
10-Hydroxydecanoic acid	ME581056	0.98	0.81	1.28
Lumichrome	ME581223	1.00	0.81	1.30
Stachydrine (nv)	ME581309	1.04	0.81	1.22
Tridecanoic acid	ME581328	1.07	0.78	1.24
Undecanoic acid	ME581333	1.20	0.71	1.22
Pyruvate	ME581290	1.17	0.80	1.13
Uracil	ME581334	1.15	0.82	1.12
Myristoleic acid	ME581236	1.13	0.78	1.18
Indoxyl Sulfate	ME581207	1.11	0.83	1.14
10-HAD	ME581055	1.09	0.82	1.16
Decanoic acid	ME581142	1.09	0.82	1.18
2^-Deoxy-5^-Adenosine Monophosphate (dAMP)	ME581065	1.45	0.53	1.26
Methyl Galactoside	ME581228	1.51	0.60	1.11
Guanosine	ME581194	1.34	0.72	1.09
Adenosine	ME581092	1.37	0.64	1.17
Deoxyguanosine	ME581147	1.37	0.64	1.17

Factors:

F1	Genotype:Tsc1-knockout \| Treatment:none
F2	Genotype:Tsc1-knockout \| Treatment:rapamycin
F3	Genotype:Wild-type \| Treatment:none

Data matrix