Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002840)

(Analysis AN004647)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9	F10
Inosine-5^-monophosphate	ME738373	2.92	0.05	0.12	0.13	0.11	0.09	0.22	6.12	0.06	0.18
Cis-aconitate	ME738347	7.33	0.12	0.11	0.14	0.21	0.27	0.13	1.39	0.15	0.15
methylmaleate	ME738380	6.92	0.16	0.18	0.24	0.35	0.37	0.24	1.10	0.20	0.23
Homovanillin	ME738372	4.68	0.50	0.45	0.40	0.33	0.32	0.52	2.04	0.41	0.36
Citric acid	ME738348	5.04	0.24	0.27	0.57	0.67	1.04	0.46	0.86	0.30	0.54
Pyruvate	ME738387	3.83	0.60	0.60	0.68	0.83	0.69	0.65	0.93	0.55	0.64
Xanthine	ME738396	2.77	1.58	0.19	0.13	0.22	0.08	0.27	3.16	1.41	0.20
D-Mannitol	ME738354	2.52	2.57	0.10	0.15	0.30	0.13	0.08	2.38	1.55	0.22
Galactitol	ME738356	2.52	2.58	0.10	0.15	0.30	0.13	0.08	2.37	1.55	0.22
Homovanillate	ME738371	2.32	0.32	1.78	0.19	0.12	0.02	2.33	2.47	0.17	0.27
Phenylpyruvate	ME738383	2.27	0.32	1.84	0.19	0.14	0.02	2.38	2.40	0.17	0.27
Hexose diphosphate	ME738367	1.17	0.70	0.69	0.68	2.54	1.51	0.39	1.34	0.64	0.34
Galactonate	ME738357	2.94	0.74	1.60	0.66	0.48	0.24	1.44	0.50	0.85	0.56
Isopropylmalate	ME738374	2.46	0.65	1.15	0.67	1.29	0.48	1.01	1.27	0.60	0.41
methylmalate	ME738379	2.53	0.85	1.03	1.08	0.51	0.33	1.03	1.19	0.67	0.77
2^-Doxy-Guanosine	ME738328	2.36	0.67	0.61	0.63	1.21	0.64	0.57	1.87	0.71	0.73
Adenosine	ME738338	2.55	0.65	0.59	0.62	1.18	0.62	0.56	1.84	0.69	0.71
deoxyguanosine	ME738352	2.49	0.66	0.60	0.62	1.19	0.63	0.57	1.84	0.69	0.72
erythro-4-Hydroxyglutamate	ME738355	2.15	0.44	0.72	0.67	1.40	0.64	0.59	2.21	0.54	0.65
Glucono-1,5-lactone 6-phosphate	ME738358	2.28	0.51	0.96	0.53	1.14	0.53	0.95	2.14	0.54	0.43
Glutamylcysteine	ME738361	2.65	0.95	0.91	0.71	0.49	0.28	0.57	1.99	0.78	0.68
Propionyladenylate	ME738386	2.76	0.77	0.54	0.48	0.52	0.30	0.71	2.45	0.85	0.62
Hexose phosphates	ME738368	1.47	0.87	0.47	0.82	1.55	0.97	0.41	1.63	0.96	0.85
Sedoheptulose 7-phosphate	ME738388	1.61	0.79	0.28	0.67	1.31	1.02	0.37	2.39	0.72	0.84
5-Oxo-proline	ME738336	1.56	1.03	1.12	0.62	0.78	0.34	1.33	1.50	0.82	0.90
Adenosine monophosphate (AMP)	ME738340	1.11	0.91	1.04	0.94	0.96	0.78	1.14	1.21	0.84	1.07
UMP	ME738395	1.29	0.89	1.05	0.77	1.00	0.65	1.10	1.47	0.90	0.87
Dihydroxy-3-methylvalerate	ME738353	1.26	1.00	1.16	0.89	0.88	0.57	0.93	1.58	0.98	0.75
2.3-Dihydrozy-2-methylpentanoate	ME738327	1.27	0.99	1.16	0.89	0.88	0.57	0.93	1.59	0.98	0.75
Pantoate	ME738382	1.27	0.99	1.16	0.89	0.87	0.57	0.93	1.58	0.98	0.75
Alpha-Ketoglutaric acid	ME738343	1.87	0.79	1.02	1.04	0.95	0.75	0.84	1.23	0.65	0.86
succinate semialdehyde	ME738390	1.96	0.82	1.04	1.03	0.96	0.75	0.81	1.19	0.60	0.84
Cytidine monophosphate (CMP)	ME738350	1.78	0.76	0.85	0.61	1.01	0.94	0.89	1.86	0.61	0.68
GMP	ME738364	1.63	0.87	0.80	0.66	1.01	1.07	0.84	1.74	0.67	0.71
glutamine	ME738360	0.46	0.28	2.57	0.79	0.98	0.25	2.72	0.89	0.27	0.79
3-Deoxy-arabino-heptulonate 7-phosphate	ME738333	0.47	2.03	0.73	0.56	2.02	0.82	0.56	0.52	1.88	0.41
L-Ascorbic acid	ME738376	1.32	2.32	1.29	0.69	0.49	0.31	1.16	0.24	1.47	0.69
phophoenolpyruvate	ME738384	0.22	1.69	1.72	0.79	0.73	0.62	1.24	0.37	1.69	0.93
UDP-acetylmuramate (UDP-MurNAc)	ME738392	0.12	1.89	1.25	0.75	1.27	0.80	0.95	0.42	1.81	0.74
Aspartate 4-semialdehyde	ME738346	0.30	1.54	1.00	1.67	0.83	0.66	0.53	0.31	2.05	1.10
D-ala-D-ala	ME738351	0.14	1.32	1.02	1.33	0.64	1.24	0.99	0.16	1.75	1.41
N-acetyl-2,4-diaminobutanoate	ME738381	0.14	1.32	1.01	1.33	0.64	1.24	1.00	0.16	1.75	1.41
AICAR	ME738341	0.79	1.20	1.68	0.91	0.75	0.57	1.65	0.33	1.36	0.76
Glutamic acid	ME738359	0.98	1.16	1.44	0.87	0.76	0.55	1.51	0.68	1.23	0.81
4-Acetylaminobutanal	ME738335	0.74	0.80	1.60	1.27	0.71	0.39	1.39	1.06	1.00	1.03
2-Deoxy-D-Ribose	ME738330	0.84	1.06	1.81	0.87	0.78	0.43	1.60	0.80	0.87	0.94
malate	ME738377	0.63	0.89	1.96	1.08	0.90	0.64	1.47	0.68	0.81	0.95
2-deoxyadenosine	ME738329	0.52	1.39	1.26	1.01	1.03	0.53	1.46	0.57	1.06	1.18
lactate	ME738375	0.63	1.61	1.17	0.85	1.03	0.56	1.08	0.91	1.31	0.86
succinate	ME738389	0.87	1.44	1.19	0.99	1.09	0.60	1.20	0.70	1.08	0.84
UDP-hexose	ME738394	0.62	1.12	1.44	0.98	0.89	0.75	1.37	1.30	0.59	0.94
Adenosine diphosphate (ADP)	ME738339	0.25	1.00	1.56	1.16	0.93	0.80	1.65	0.56	0.97	1.12
Acetolactate	ME738337	0.50	0.91	1.16	1.17	1.03	0.90	1.26	0.90	0.89	1.28
Cytidine diphosphate (CDP)	ME738349	0.49	0.73	1.28	1.17	1.17	1.16	1.38	0.70	0.72	1.18
Guanosine diphosphate (GDP)	ME738365	0.42	0.99	1.31	0.90	1.04	1.19	1.29	0.81	1.17	0.88
Phosphoribosyl-AMP	ME738385	0.66	0.93	1.37	1.07	1.10	0.97	1.14	0.59	1.07	1.10
Alanine	ME738342	0.25	1.02	1.05	1.47	1.20	1.04	1.12	0.27	1.16	1.42
asparagine	ME738345	0.03	1.07	1.03	1.07	1.50	0.88	1.68	0.04	0.99	1.72
Glycine	ME738363	0.38	1.57	1.37	1.34	0.50	0.28	1.40	0.46	1.54	1.17
Arabinose	ME738344	0.33	1.08	1.62	1.34	0.82	0.29	1.61	0.29	1.07	1.56
Homocysteine	ME738370	0.01	1.26	1.55	1.53	1.18	0.63	1.48	0.00	1.37	1.00
2-Oxoisovalerate	ME738332	0.24	1.27	1.35	0.98	1.04	0.72	1.58	0.26	1.38	1.18
2-Oxoisocaproate	ME738331	0.14	1.35	1.14	1.05	0.92	0.76	1.60	0.18	1.44	1.42
3-Methyl-2-oxopentanoate	ME738334	0.14	1.34	1.15	1.05	0.92	0.76	1.59	0.18	1.43	1.43
UDPGlcNAc	ME738393	0.16	0.81	1.96	1.28	1.71	0.57	1.35	0.27	1.00	0.89
Glycerate	ME738362	0.25	0.73	2.05	0.68	1.25	0.32	2.57	0.20	0.57	1.37
Homocitrate	ME738369	0.37	1.50	1.79	0.77	1.20	0.39	1.87	0.26	0.95	0.91
Methylcitrate	ME738378	0.37	1.50	1.78	0.77	1.19	0.39	1.87	0.26	0.95	0.91
Hexose	ME738366	0.22	0.93	2.03	1.13	0.66	0.30	2.03	0.33	1.11	1.26
UDP	ME738391	0.30	0.69	2.16	1.27	0.60	0.73	1.90	0.55	0.79	1.00

Factors:

F1	Genotype:mnePmneS_Mn_treated
F2	Genotype:mnePmneS_untreated
F3	Genotype:sodA_Mn_treated
F4	Genotype:sodA_untreated
F5	Genotype:WTCU1065_Mn_treated
F6	Genotype:WTCU1065_untreated
F7	Genotype:yqgC_Mn_treated
F8	Genotype:yqgC-sodA_Mn_treated
F9	Genotype:yqgC-sodA_untreated
F10	Genotype:yqgC_untreated

Data matrix