Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003301)

(Analysis AN005408)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9	F10	F11	F12	F13	F14	F15	F16	F17	F18	F19	F20	F21	F22	F23	F24	F25	F26	F27	F28	F29	F30	F31	F32	F33	F34	F35	F36	F37	F38	F39	F40	F41	F42	F43	F44	F45	F46	F47	F48	F49	F50	F51	F52	F53	F54
Isocaproate	ME865315	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.17	0.34	0.18	0.38	0.17	0.41	0.21	0.30	0.15	0.18	0.77	0.43	0.40	0.26	0.44	0.42	0.32	0.40	2.16	2.92	3.60	3.18	3.64	2.94	3.71	2.54	3.15	0.25	0.65	0.73	0.50	0.65	0.56	0.62	0.55	0.65	0.34	0.63	0.45	0.54	0.53	0.59	0.65	0.47	0.43
Butyrate	ME865313	1.76	1.95	1.32	1.87	1.60	1.76	1.29	1.69	2.20	0.55	0.87	0.54	0.77	0.43	0.69	0.41	0.51	0.59	0.54	1.59	0.61	0.76	0.44	0.65	0.44	0.64	0.58	0.43	1.37	0.90	1.25	0.87	1.45	0.90	1.03	0.94	0.26	1.21	0.96	0.73	0.71	0.96	0.70	0.62	0.68	0.79	1.75	0.93	1.35	0.87	1.20	1.23	0.82	0.76
Acetate	ME865311	0.96	1.12	1.16	0.94	1.13	0.98	0.96	0.95	1.32	0.51	0.68	0.84	0.60	0.58	0.60	0.65	0.48	0.64	0.69	1.37	1.09	0.87	0.87	0.74	0.84	0.78	0.90	0.51	1.34	1.18	1.39	1.06	1.32	1.04	1.14	1.08	0.47	1.17	1.42	0.96	1.11	0.99	1.08	0.92	0.91	0.89	1.44	1.07	1.15	1.12	1.14	1.49	0.89	1.01
Propionate	ME865312	0.74	0.95	0.70	0.79	0.80	0.80	0.62	0.77	1.12	0.32	0.55	0.56	0.53	0.42	0.47	0.43	0.36	0.59	0.98	1.99	1.17	1.04	0.85	0.93	0.82	0.96	1.06	0.67	1.82	1.27	1.74	1.19	1.77	1.17	1.46	1.30	0.37	1.53	1.58	0.89	1.04	1.11	1.04	0.78	0.82	0.84	1.67	0.90	1.22	0.93	1.09	1.29	0.77	0.85
Caproate	ME865314	0.70	1.86	0.96	1.56	0.92	1.36	0.81	1.09	0.98	1.35	1.65	0.86	1.70	0.83	1.77	0.91	1.52	0.79	0.20	0.48	0.29	0.41	0.24	0.35	0.27	0.34	0.27	NA	0.02	0.01	0.02	0.02	0.01	0.01	0.02	0.02	0.75	1.74	1.52	1.55	1.72	1.64	1.61	1.66	1.88	0.80	1.41	0.88	1.25	1.00	1.28	1.09	1.15	0.85
Isobutyrate	ME865319	NA	0.03	NA	NA	0.03	0.00	0.00	NA	0.14	0.58	1.04	3.78	1.11	0.76	0.91	0.75	0.79	1.25	0.36	2.18	0.79	0.86	0.59	0.67	0.53	0.78	0.69	NA	0.10	0.08	0.17	0.24	0.24	0.19	0.12	0.27	0.57	2.20	2.20	1.03	1.51	1.80	1.38	1.04	1.23	0.52	1.30	0.84	0.94	0.63	0.76	1.04	0.40	0.60
Valerate	ME865316	0.06	0.56	0.17	0.20	0.20	0.50	0.23	0.12	0.49	0.56	1.04	0.76	1.12	0.60	0.85	0.43	0.71	0.89	0.56	2.64	0.89	0.98	0.56	0.71	0.49	0.85	0.80	NA	0.95	0.50	0.94	0.54	1.17	0.63	0.76	0.71	0.59	2.37	2.00	1.47	1.86	2.25	1.60	1.45	1.69	0.83	1.76	1.05	1.50	1.01	1.21	1.41	0.75	0.91
2-Methylbutyrate	ME865318	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.41	1.08	1.15	1.15	0.72	0.93	0.71	0.70	1.20	0.22	2.72	0.82	0.93	0.52	0.67	0.41	0.78	0.66	NA	0.08	0.02	0.15	0.25	0.24	0.20	0.07	0.23	0.66	2.54	2.45	1.09	1.72	2.10	1.55	1.14	1.37	0.43	1.21	0.78	0.77	0.54	0.91	0.93	0.27	0.49
Isovalerate	ME865317	NA	NA	NA	NA	NA	NA	NA	NA	NA	0.63	1.05	1.11	1.16	0.72	0.91	0.70	0.75	1.24	0.26	2.43	0.78	0.81	0.52	0.60	0.44	0.74	0.66	NA	0.10	0.08	0.11	0.11	0.29	0.17	0.09	0.27	0.73	2.22	2.21	1.11	1.66	2.04	1.48	1.18	1.38	0.73	1.55	1.07	1.16	0.92	1.07	1.35	0.61	0.86

Factors:

F1	donor:D1 \| timepoint:0h \| oxyesgeno:fresh
F2	donor:D1 \| timepoint:168h \| oxyesgeno:no
F3	donor:D1 \| timepoint:168h \| oxyesgeno:yes
F4	donor:D1 \| timepoint:24h \| oxyesgeno:no
F5	donor:D1 \| timepoint:24h \| oxyesgeno:yes
F6	donor:D1 \| timepoint:48h \| oxyesgeno:no
F7	donor:D1 \| timepoint:48h \| oxyesgeno:yes
F8	donor:D1 \| timepoint:4h \| oxyesgeno:no
F9	donor:D1 \| timepoint:4h \| oxyesgeno:yes
F10	donor:D2 \| timepoint:0h \| oxyesgeno:fresh
F11	donor:D2 \| timepoint:168h \| oxyesgeno:no
F12	donor:D2 \| timepoint:168h \| oxyesgeno:yes
F13	donor:D2 \| timepoint:24h \| oxyesgeno:no
F14	donor:D2 \| timepoint:24h \| oxyesgeno:yes
F15	donor:D2 \| timepoint:48h \| oxyesgeno:no
F16	donor:D2 \| timepoint:48h \| oxyesgeno:yes
F17	donor:D2 \| timepoint:4h \| oxyesgeno:no
F18	donor:D2 \| timepoint:4h \| oxyesgeno:yes
F19	donor:D3 \| timepoint:0h \| oxyesgeno:fresh
F20	donor:D3 \| timepoint:168h \| oxyesgeno:no
F21	donor:D3 \| timepoint:168h \| oxyesgeno:yes
F22	donor:D3 \| timepoint:24h \| oxyesgeno:no
F23	donor:D3 \| timepoint:24h \| oxyesgeno:yes
F24	donor:D3 \| timepoint:48h \| oxyesgeno:no
F25	donor:D3 \| timepoint:48h \| oxyesgeno:yes
F26	donor:D3 \| timepoint:4h \| oxyesgeno:no
F27	donor:D3 \| timepoint:4h \| oxyesgeno:yes
F28	donor:D4 \| timepoint:0h \| oxyesgeno:fresh
F29	donor:D4 \| timepoint:168h \| oxyesgeno:no
F30	donor:D4 \| timepoint:168h \| oxyesgeno:yes
F31	donor:D4 \| timepoint:24h \| oxyesgeno:no
F32	donor:D4 \| timepoint:24h \| oxyesgeno:yes
F33	donor:D4 \| timepoint:48h \| oxyesgeno:no
F34	donor:D4 \| timepoint:48h \| oxyesgeno:yes
F35	donor:D4 \| timepoint:4h \| oxyesgeno:no
F36	donor:D4 \| timepoint:4h \| oxyesgeno:yes
F37	donor:D5 \| timepoint:0h \| oxyesgeno:fresh
F38	donor:D5 \| timepoint:168h \| oxyesgeno:no
F39	donor:D5 \| timepoint:168h \| oxyesgeno:yes
F40	donor:D5 \| timepoint:24h \| oxyesgeno:no
F41	donor:D5 \| timepoint:24h \| oxyesgeno:yes
F42	donor:D5 \| timepoint:48h \| oxyesgeno:no
F43	donor:D5 \| timepoint:48h \| oxyesgeno:yes
F44	donor:D5 \| timepoint:4h \| oxyesgeno:no
F45	donor:D5 \| timepoint:4h \| oxyesgeno:yes
F46	donor:D6 \| timepoint:0h \| oxyesgeno:fresh
F47	donor:D6 \| timepoint:168h \| oxyesgeno:no
F48	donor:D6 \| timepoint:168h \| oxyesgeno:yes
F49	donor:D6 \| timepoint:24h \| oxyesgeno:no
F50	donor:D6 \| timepoint:24h \| oxyesgeno:yes
F51	donor:D6 \| timepoint:48h \| oxyesgeno:no
F52	donor:D6 \| timepoint:48h \| oxyesgeno:yes
F53	donor:D6 \| timepoint:4h \| oxyesgeno:no
F54	donor:D6 \| timepoint:4h \| oxyesgeno:yes

Data matrix