Clustering data with hclust algorithm for (Study ST003726)

(Analysis AN006112)
MetaboliteStructureF1F2F3F4F5F6F7F8F9F10F11F12F13
5-carbamoylmethyluridine_1ME9756510.010.190.001.3817.380.010.010.010.020.320.010.000.01
dihydrouridineME9755812.850.190.010.0119.190.010.010.010.000.070.010.020.01
5-carbamoylmethyluridine_2ME9756520.010.250.000.1821.600.000.000.000.000.010.010.000.02
N6-isopentenyladenosine_1ME9755900.200.160.000.0121.430.000.000.000.000.000.000.150.00
N6-isopentenyladenosine_2ME9755910.200.150.000.0121.450.000.000.000.000.000.000.140.00
inosineME9756570.221.010.040.1019.640.020.040.040.050.070.380.010.02
5-methoxycarbonylmethyl-2-thiouridine_2ME9756380.010.160.000.0020.450.010.340.000.360.000.000.070.01
5-methoxycarbonylmethyluridine_1ME9756390.020.010.020.0320.540.030.050.040.380.040.040.010.19
5-methoxycarbonylmethyluridine_2ME9756400.010.030.030.0220.780.010.030.030.370.040.100.010.02
3-methylcytidineME9756120.010.590.000.0020.010.000.010.010.110.000.000.000.01
5-methoxycarbonylmethyl-2-thiouridine_1ME9756370.010.150.010.0019.800.020.380.020.380.010.000.030.02
8-methyladenosineME97563611.507.540.000.040.360.010.150.020.720.050.130.010.09
N6-methyladenosineME97563011.457.580.000.040.370.010.150.020.720.050.130.010.09
2-methyladenosineME97560922.480.000.000.000.000.000.000.000.000.000.000.000.00
uridine 5-oxyacetic acid methyl ester_2ME97564321.980.030.040.020.010.020.040.010.020.010.020.060.03
uridine 5-oxyacetic acid methyl ester_3ME97564421.770.010.020.010.010.040.000.020.010.020.220.010.01
5,2^-O-dimethylcytidineME97562314.960.020.000.000.000.020.430.012.110.000.040.000.12
N4,2^-O-dimethylcytidineME97562115.000.030.000.000.000.010.430.012.110.000.040.000.12
uridine 5-oxyacetic acid methyl ester_1ME97564218.790.040.080.090.020.080.060.020.510.040.450.020.25
2-methylthio-N6-isopentenyladenosine_1ME97564819.202.740.000.000.010.000.000.000.000.010.010.000.00
2-methylthio-N6-isopentenyladenosine_2ME97564917.582.530.130.080.010.150.140.160.160.000.000.010.15
N6-methyl-N6-threonylcarbamoyladenosine_2ME97563416.822.460.070.030.070.130.050.130.100.060.050.040.07
N2,N2,7-trimethylguanosine_1ME9756030.102.220.640.581.310.420.450.110.411.180.0710.070.12
pseudouridineME9756531.695.790.000.516.520.000.230.010.980.001.050.000.97
3-methyluridineME9756155.493.110.000.005.960.020.870.000.620.001.420.000.65
N6,N6-dimethyladenosineME9756285.463.290.011.274.090.010.110.020.610.011.060.081.03
7-methylguanosineME9756358.601.630.000.0010.570.000.030.010.220.010.250.010.29
1-methylguanosineME9755993.170.250.000.5211.380.010.370.000.920.000.770.010.70
5-methyluridineME9756263.610.130.090.3410.140.192.860.010.020.060.390.000.22
3-methylpseudouridine_1ME9756139.630.020.011.150.020.061.550.020.010.072.220.021.01
5-carboxymethylaminomethyluridine_2ME9755799.321.460.730.640.450.790.620.340.370.340.300.340.67
5-methylaminomethyl-2-thiouridine_2ME9756468.300.010.034.530.010.000.000.000.000.010.000.000.01
5-hydroxyuridineME9755893.690.450.244.050.250.500.660.100.300.640.330.070.08
5-methylaminomethyl-2-thiouridine_1ME9756455.620.000.033.070.000.000.02NANA0.000.050.00NA
N2,2^-O-dimethylguanosineME9756110.000.000.060.610.000.266.510.000.020.022.230.011.52
3-methylpseudouridine_2ME9756140.910.000.070.800.000.358.860.000.000.000.230.000.10
N4-methylcytidine_2ME9756200.010.050.180.830.000.507.290.000.00NANA0.000.00
5-carboxymethyluridine_2ME9755770.000.000.092.020.000.256.870.000.000.000.000.000.00
5,2^-O-dimethyluridineME9756270.000.080.032.610.000.117.150.000.000.000.000.000.00
N2,N2,7-trimethylguanosine_2ME9756040.000.050.022.580.020.227.390.000.010.000.00NA0.00
4-demethylwyosineME9755940.000.000.074.010.100.051.430.000.66NANA0.000.86
1-methylpseudouridine_1ME9756010.020.100.135.330.160.010.030.030.080.081.970.011.01
1-methylpseudouridine_2ME9756020.000.060.115.360.160.010.030.020.070.012.040.001.05
N6-methyl-N6-threonylcarbamoyladenosine_1ME9756330.010.000.087.700.000.121.170.000.000.000.000.000.00
N6-formyladenosine_2ME9755840.110.460.106.130.160.060.070.070.120.020.451.080.34
3,2^-O-dimethyluridineME9756160.050.060.536.360.150.190.220.060.060.200.190.060.13
2,8-dimethyladenosineME9756080.120.020.126.500.120.120.230.100.100.090.110.380.43
N6-formyladenosine_1ME9755830.090.040.126.770.040.070.090.110.150.080.070.030.10
N2,7-dimethylguanosine_1ME9756060.040.020.000.000.160.160.460.020.020.034.904.264.22
N2,7-dimethylguanosine_2ME9756070.010.000.010.730.010.010.000.000.010.035.80NA4.87
N4,N4-dimethylcytidineME9756170.000.000.000.000.000.000.000.000.000.017.010.115.55
N4-acetyl-2^-O-methylcytidine_1ME9755680.000.000.000.000.010.030.690.012.040.013.780.044.52
N4-acetyl-2^-O-methylcytidine_2ME9755690.000.000.000.000.000.020.460.012.510.012.630.005.81
N4-acetylcytidine_1ME9755660.000.570.010.011.550.020.560.011.370.104.710.093.54
N4-acetylcytidine_2ME9755670.000.550.000.001.510.020.560.011.370.104.550.103.50
2-thiouridineME9756600.100.010.010.250.000.102.070.001.440.004.660.002.44
5-methyl-2-thiouridineME9756250.000.000.020.010.010.212.940.020.030.025.180.023.73
5-methoxyuridineME9756470.100.171.810.190.160.620.230.700.551.304.100.022.02
5-carboxymethylaminomethyluridine_3ME9755801.620.350.122.140.591.040.360.420.310.231.910.492.88
4-thiouridineME9756621.220.000.011.790.000.060.140.011.380.024.040.012.13
5-carboxymethylaminomethyluridine_1ME9755780.230.140.142.320.150.230.110.090.280.283.070.294.08
2-thiocytidineME9756590.330.000.013.690.190.000.000.000.020.013.380.032.70
5-methyldihydrouridineME9756240.070.050.013.470.200.000.020.020.010.023.500.002.74
N6-acetyladenosine_1ME9755700.030.040.150.060.073.331.260.263.650.110.300.070.41
2-thio-2^-O-methyluridineME9756610.060.130.130.060.110.213.670.194.350.190.080.080.11
5-methoxycarbonylmethyl-2^-O-methyluridineME9756410.030.040.020.030.050.020.520.036.990.010.020.060.03
1,2^-O-dimethyladenosineME9755980.041.340.110.080.050.131.020.095.030.040.320.041.59
isowyosineME9755950.000.000.020.880.000.050.970.034.52NANA0.000.14
N4,N4,2^-O-trimethylcytidineME9756180.150.331.520.990.280.270.490.273.910.140.150.101.01
N2-methylguanosineME9756103.940.280.000.484.700.050.990.012.380.010.970.000.64
N2,N2-dimethylguanosineME9756050.000.080.000.746.860.020.740.012.840.011.150.000.64
N6-threonylcarbamoyladenosine_1ME9756630.510.120.010.466.420.041.580.013.400.000.050.050.30
N6-threonylcarbamoyladenosine_2ME9756640.540.130.010.476.560.041.580.013.330.000.050.060.29
1-methyladenosineME9755970.000.460.010.743.700.051.140.023.010.011.250.011.46
5-methylcytidineME9756221.030.550.010.164.260.030.730.012.470.032.210.061.77
N4-methylcytidine_1ME9756191.010.540.010.164.160.030.960.012.410.032.160.061.73
5-carboxymethyluridine_1ME9755761.662.640.301.273.350.240.491.030.720.151.191.561.04
N6-hydroxymethyladenosine_1ME9755872.331.440.580.622.350.170.460.351.940.781.210.151.21
N6-hydroxymethyladenosine_2ME9755882.921.740.490.582.620.130.210.212.150.751.070.020.99
cytidineME9756552.832.920.550.952.500.300.560.561.100.511.010.340.91
guanosineME9756563.222.900.740.902.580.250.510.430.930.601.210.090.78
adenosineME9756543.422.821.060.993.170.370.380.600.690.680.700.260.55
uridineME9756582.902.101.360.963.000.470.480.930.830.530.830.060.55
3-(3-amino-3-carboxypropyl)uridineME9755722.900.611.010.620.100.320.861.621.151.201.840.040.96
5-formylcytidineME9755823.770.740.921.080.010.120.480.681.260.801.770.011.06
5-carboxycytidineME9755740.050.291.261.360.271.071.111.510.941.121.35NA0.90
N6,N6,2^-O-trimethyladenosineME9756290.680.511.180.902.370.931.101.350.791.440.340.341.24
1-methylinosineME9756000.000.030.011.340.780.071.460.013.020.011.770.011.31
N6-acetyladenosine_2ME9755710.180.540.860.391.470.450.510.562.390.521.770.601.75
O6-methylguanineME9756322.911.340.640.551.550.630.390.521.310.990.722.091.20
2-methylthio-N6-methyladenosineME9756500.931.040.830.981.660.410.620.731.530.900.731.450.69
N6-(cis-hydroxyisopentenyl)adenosineME9755960.861.580.620.482.040.430.460.392.351.381.090.590.39
2^-O-methylinosine_1ME9755921.111.200.620.481.400.561.110.370.890.912.202.020.99
2^-O-methylinosine_2ME9755931.770.610.531.000.690.210.340.322.010.582.001.111.11
5-hydroxymethylcytidineME9755860.952.810.380.090.210.362.400.142.790.130.380.161.33
2^-O-methylcytidineME9755750.353.710.010.692.290.030.710.022.850.021.180.061.03
2^-O-methylguanosineME9755850.675.090.010.273.450.030.800.021.550.032.180.021.14
2^-O-methyluridineME9756650.635.000.010.262.790.031.070.021.940.041.890.010.93
2^-O-methyladenosineME9755730.0210.920.000.007.680.010.250.000.740.000.410.000.20
N6,2^-O-dimethyladenosineME9756310.0521.280.000.030.030.000.010.000.030.020.050.750.03

Factors:

F1Species:Escherichia coli | Sample source:Total RNA
F2Species:Homo sapiens | Sample source:Total RNA
F3Species:Methanococcus maripaludis | Sample source:rRNA_depletion
F4Species:Methanococcus maripaludis | Sample source:Total RNA
F5Species:Saccharomyces cerevisiae | Sample source:Total RNA
F6Species:Sulfolobus acidocaldarius | Sample source:rRNA_depletion
F7Species:Sulfolobus acidocaldarius | Sample source:Total RNA
F8Species:Sulfolobus islandicus | Sample source:rRNA_depletion
F9Species:Sulfolobus islandicus | Sample source:Total RNA
F10Species:Thermococcus kodakarensis | Sample source:rRNA_depletion
F11Species:Thermococcus kodakarensis | Sample source:Total RNA
F12Species:Thermococcus sp. AM4 | Sample source:rRNA_depletion
F13Species:Thermococcus sp. AM4 | Sample source:Total RNA
Data matrix
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