Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST004244)

(Analysis AN007065)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
acetylcholine	ME1148704	1.36	1.80	0.79	0.53	0.29	0.66
thymidine	ME1148808	0.80	1.10	0.62	1.44	1.24	NA
arginine	ME1148712	1.12	1.71	1.10	0.92	0.90	0.25
5-adenosylhomocysteine	ME1148701	0.97	1.19	1.00	0.86	1.14	0.06
2-deoxycytidine	ME1148700	1.03	1.04	0.99	0.81	1.12	NA
phosphoethanolamine	ME1148789	1.03	1.08	1.02	0.82	1.05	NA
NMMA	ME1148782	1.09	1.18	1.14	0.94	0.98	0.01
spermidine	ME1148804	1.18	1.23	1.15	0.98	1.12	0.01
phosphocholine	ME1148788	1.17	1.35	1.19	0.99	1.30	0.00
cytosine	ME1148757	1.27	1.30	1.19	0.92	1.21	0.11
s-adenosylmethionine	ME1148800	1.22	1.38	1.20	0.96	1.18	0.06
putrescine	ME1148798	1.27	1.22	1.24	1.13	1.13	0.01
ornithine	ME1148783	1.18	1.42	1.24	1.04	1.05	0.07
ADMA	ME1148706	1.20	1.32	1.34	1.05	1.09	0.00
lysine	ME1148776	1.22	1.28	1.28	1.09	1.01	0.11
xanthosine	ME1148817	1.15	1.03	0.96	0.97	1.15	0.32
methylthioadenosine	ME1148779	1.18	1.13	1.15	1.23	1.16	0.15
ornithine[13]C1[15]N1	ME1148785	1.19	1.13	1.18	1.02	1.06	0.41
ornithine[15]N	ME1148784	1.22	1.25	1.22	1.02	1.05	0.24
proline	ME1148794	1.16	1.26	1.18	0.99	0.10	1.31
cotinine	ME1148754	0.92	1.07	1.86	0.72	0.86	0.98
thiamine	ME1148806	1.00	1.08	1.04	0.88	1.01	0.99
phenylalanine-d8	ME1148691	1.03	0.98	1.08	0.97	1.02	0.92
valine-d8	ME1148692	0.99	0.98	1.05	0.98	1.04	0.96
kynurenic acid	ME1148774	1.01	1.26	1.05	0.94	0.98	0.76
arginine[15]N	ME1148713	1.08	1.22	1.01	0.87	0.89	0.93
dimethylglycine	ME1148758	1.07	1.15	0.99	0.95	0.97	0.87
adenosine	ME1148705	0.97	1.07	0.88	1.00	1.26	0.82
trimethylamine-N-oxide	ME1148813	1.02	1.20	1.03	1.04	1.13	0.59
histamine	ME1148770	0.95	1.22	0.90	0.74	0.85	1.64
anthranilic acid	ME1148711	1.11	0.98	0.80	0.80	1.03	1.31
arginine[13]C1[15]N1	ME1148714	1.06	1.00	0.97	0.86	0.88	1.24
cAMP	ME1148747	0.76	1.02	0.98	1.15	0.91	1.25
carnosine	ME1148748	0.88	0.89	0.98	0.93	0.81	1.48
5-hydroxytryptophan	ME1148703	0.03	0.06	NA	0.02	NA	1.48
proline[13]C1[15]N1	ME1148796	0.08	0.12	NA	NA	NA	1.30
C14 carnitine	ME1148737	0.01	0.01	0.01	0.01	0.01	2.16
C18:2 carnitine	ME1148743	NA	NA	0.01	0.01	0.01	1.83
niacinamide	ME1148781	0.85	0.75	0.78	0.68	0.80	2.14
choline	ME1148749	0.68	0.68	0.68	0.56	0.83	2.58
threonine	ME1148807	0.72	0.76	0.71	0.65	0.55	2.61
C4-OH carnitine	ME1148727	0.51	0.43	0.54	0.53	0.52	2.55
pipecolic acid	ME1148790	0.59	0.66	0.71	0.70	0.38	2.34
C4 carnitine	ME1148726	0.33	0.29	0.27	0.33	0.26	2.76
taurine	ME1148805	0.55	0.67	0.61	0.62	0.55	3.00
1-methylnicotinamide	ME1148695	0.49	0.80	0.42	0.40	0.49	3.39
asparagine	ME1148717	0.48	0.50	0.49	0.44	0.43	3.65
C5 carnitine	ME1148728	0.47	0.51	0.45	0.55	0.49	3.54
carnitine	ME1148722	0.52	0.43	0.55	0.63	0.48	3.39
aspartate	ME1148718	0.55	0.67	0.53	0.50	0.51	3.24
C26 carnitine	ME1148746	0.55	0.59	0.58	0.48	0.52	3.29
C20 carnitine	ME1148744	0.52	0.52	0.52	0.50	0.52	3.41
histidine	ME1148771	0.52	0.61	0.52	0.49	0.45	3.41
C18 carnitine	ME1148741	0.21	0.19	0.21	0.22	0.21	4.95
phenylalanine	ME1148787	0.20	0.22	0.21	0.21	0.18	4.99
proline[15]N	ME1148795	0.25	0.24	0.25	0.24	0.12	4.91
creatine	ME1148755	0.22	0.19	0.24	0.26	0.20	4.89
glutamine[13]C5	ME1148768	0.26	0.22	0.24	0.23	0.20	4.84
isoleucine	ME1148773	0.18	0.20	0.18	0.19	0.14	5.11
glutamine	ME1148765	0.14	0.15	0.15	0.16	0.13	5.27
pyroglutamic acid	ME1148799	0.15	0.16	0.15	0.16	0.13	5.25
C16 carnitine	ME1148740	0.03	0.02	0.03	0.03	0.03	5.87
C18:1 carnitine	ME1148742	0.08	0.06	0.08	0.10	0.07	5.60
methionine	ME1148777	0.11	0.12	0.12	0.12	0.10	5.43
C20:4 carnitine	ME1148745	0.08	0.07	0.06	0.10	0.08	3.46
tyrosine	ME1148815	0.33	0.37	0.35	0.32	0.27	4.36
creatinine	ME1148756	0.32	0.34	0.34	0.39	0.31	4.30
trans-hydroxyproline	ME1148809	0.37	0.38	0.37	0.35	0.28	4.26
glutamate	ME1148761	0.34	0.52	0.32	0.31	0.30	4.22
betaine	ME1148720	0.38	0.36	0.38	0.39	0.37	4.12
valine	ME1148816	0.37	0.39	0.38	0.37	0.35	4.14
alanine	ME1148707	0.35	0.40	0.35	0.34	0.31	4.14
beta-alanine	ME1148719	0.38	0.42	0.34	0.36	0.33	4.16
C3-DC-CH3 carnitine	ME1148725	0.17	0.19	0.17	0.17	0.16	4.31
methionine sulfoxide	ME1148778	0.27	0.29	0.25	0.27	0.23	4.69
C2 carnitine	ME1148723	0.29	0.23	0.29	0.35	0.28	4.56
C3 carnitine	ME1148724	0.30	0.23	0.30	0.37	0.29	4.51
leucine	ME1148775	0.32	0.35	0.32	0.30	0.15	4.56
tryptophan	ME1148814	0.28	0.33	0.30	0.30	0.23	4.56
glycine	ME1148769	0.22	0.26	0.25	0.22	0.17	3.85
citrulline	ME1148750	0.46	0.67	0.37	0.39	0.34	3.77
alpha-glycerophosphocholine	ME1148709	0.45	0.46	0.46	0.40	0.42	3.82
serine	ME1148803	0.42	0.49	0.40	0.40	0.39	3.90

Factors:

F1	Sample source:infected RBC (iRBC) \| Parasite_type:del OAT 6491 bulk \| Parasite_line:Dd2∆OATAPR2 bulk \| Timepoint:10 h
F2	Sample source:infected RBC (iRBC) \| Parasite_type:del OAT D12 clone A6 \| Parasite_line:Dd2∆OATAPR2 clone 2 \| Timepoint:10 h
F3	Sample source:infected RBC (iRBC) \| Parasite_type:del OAT D12 clone B9 \| Parasite_line:Dd2∆OATAPR2 clone 1 \| Timepoint:10 h
F4	Sample source:infected RBC (iRBC) \| Parasite_type:del OAT D12 clone F7 \| Parasite_line:Dd2∆OATAPR2 clone 3 \| Timepoint:10 h
F5	Sample source:infected RBC (iRBC) \| Parasite_type:del OAT D12 \| Parasite_line:Dd2∆OAT C1 \| Timepoint:10 h
F6	Sample source:uninfected RBC (uRBC) \| Parasite_type:uninfected RBCs \| Parasite_line:Control RBCs \| Timepoint:10 h

Data matrix