Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003823)

(Analysis AN007475)

Metabolite	Structure	F1	F2	F3	F4
O.phosphoethanolamine	ME1250793	0.54	3.21	0.11	0.14
dihydroorotate	ME1250819	0.06	3.55	0.02	0.37
Ureidosuccinic_acid	ME1250816	0.06	3.57	0.02	0.35
3-phosphoglycerate	ME1250724	1.70	0.52	0.96	0.82
phosphoenolpyruvate	ME1250799	1.66	0.41	1.09	0.83
propionylcarnitine	ME1250801	1.11	0.53	1.22	1.15
Pantothenate	ME1250796	1.03	0.65	1.17	1.14
3-methyl.2.oxopentanoic_acid	ME1250723	1.04	0.59	1.21	1.17
uric.acid	ME1250817	1.00	0.62	1.19	1.19
Alpha.Ketoglutarate	ME1250729	1.02	0.48	1.28	1.23
CTP	ME1250752	1.04	0.42	1.25	1.29
UTP	ME1250818	1.06	0.37	1.24	1.34
cis.aconitate	ME1250746	1.01	0.36	1.30	1.33
citrate	ME1250747	1.08	0.33	1.30	1.29
cystathionine	ME1250754	0.87	0.53	1.40	1.21
aspartate	ME1250735	0.84	0.42	1.35	1.38
UDP.GlcNAc	ME1250813	0.87	0.43	1.36	1.34
beta.alanine	ME1250738	1.07	1.00	1.02	0.90
niacinamide	ME1250792	1.10	0.96	1.04	0.90
FAD	ME1250759	1.00	0.97	1.06	0.97
taurine	ME1250809	1.04	0.95	1.07	0.94
2-hydroxyglutarate	ME1250722	1.04	1.01	0.99	0.96
acetylcarnitine	ME1250726	1.00	1.02	0.99	0.99
carnitine	ME1250742	1.01	1.05	0.96	0.98
carnosine	ME1250743	1.02	0.97	0.96	1.05
citrulline	ME1250748	1.04	0.99	0.94	1.03
creatine	ME1250750	1.05	0.94	0.98	1.03
gamma.aminobutyric_acid	ME1250762	1.06	0.91	0.99	1.04
glycerate	ME1250768	1.05	0.92	1.00	1.03
dTMP	ME1250757	1.07	0.94	1.01	0.98
proline	ME1250800	1.11	0.95	0.97	0.98
GSSG	ME1250774	0.86	0.93	1.19	1.02
Glycerophosphocholine	ME1250770	1.00	0.76	1.14	1.11
methylthioadenosine	ME1250785	1.01	0.71	1.13	1.15
S.Adenosyl.L.Homocysteine	ME1250803	1.01	0.76	1.09	1.15
fumarate	ME1250761	0.93	0.76	1.22	1.09
NADPH	ME1250791	0.89	0.80	1.17	1.14
phosphocholine	ME1250797	0.94	0.75	1.17	1.14
Butyrylcarnitine	ME1250740	0.92	0.78	1.18	1.12
glutamate	ME1250765	0.94	0.79	1.15	1.12
Acetyl.CoA	ME1250725	0.88	0.73	1.23	1.16
betaine	ME1250739	0.94	0.71	1.17	1.18
GTP	ME1250775	0.95	0.90	1.01	1.15
mannose	ME1250782	0.93	0.88	1.03	1.15
ATP	ME1250737	0.95	0.79	1.10	1.16
tyrosine	ME1250812	0.93	0.88	1.08	1.10
Methionine.sulfoxide	ME1250783	0.94	0.86	1.07	1.13
ornithine	ME1250794	0.93	0.86	1.09	1.12
asymmetric.dimethylarginine	ME1250736	0.94	0.82	1.12	1.12
asparagine	ME1250734	0.90	0.83	1.13	1.13
glutamine	ME1250766	0.91	0.84	1.12	1.13
alanine	ME1250728	0.91	0.96	1.06	1.07
sarcosine	ME1250805	0.91	0.95	1.05	1.09
threonine	ME1250810	0.94	0.91	1.11	1.04
isoleucine	ME1250779	0.96	0.96	1.05	1.03
GSH_Ellmans	ME1250773	0.99	0.92	1.05	1.03
methionine	ME1250784	0.97	0.94	1.06	1.04
tryptophan	ME1250811	0.98	0.94	1.04	1.04
glycine	ME1250771	1.06	0.79	1.07	1.08
NAD.	ME1250788	1.03	0.85	1.06	1.06
lysine	ME1250781	1.02	0.88	1.05	1.04
ascorbate_unc	ME1250733	1.01	0.89	1.03	1.07
creatinine	ME1250751	1.01	0.88	1.04	1.06
histidine	ME1250776	1.01	0.86	1.06	1.08
Pyridoxine	ME1250802	1.01	0.87	1.04	1.08
argininosuccinate	ME1250732	0.95	0.86	1.13	1.05
arginine	ME1250731	0.99	0.85	1.11	1.06
S.Adenosyl.L.methionine	ME1250804	0.99	0.82	1.11	1.07
CDP	ME1250745	0.85	0.93	0.98	1.25
UDP	ME1250814	0.87	0.90	0.99	1.24
phosphocreatine	ME1250798	0.75	1.13	1.08	1.04
serine	ME1250807	0.86	1.05	0.96	1.13
myo.inositol	ME1250786	0.89	1.06	1.02	1.03
NADP	ME1250790	0.92	1.02	1.04	1.01
palmitate	ME1250795	1.32	0.71	0.86	1.11
Fructose.1.6.bisphosphate	ME1250760	1.26	0.79	1.03	0.91
N.acetylglutamate	ME1250787	1.28	0.85	0.98	0.90
hypotaurine	ME1250777	1.26	1.01	0.98	0.76
Cys_Ell	ME1250753	1.26	0.95	0.88	0.91
lactic_acid	ME1250780	1.22	1.00	0.92	0.86
C5.Carnitines	ME1250741	0.50	1.17	1.08	1.25
UMP	ME1250815	0.56	1.76	0.71	0.97
Glucose.6.phosphate	ME1250764	0.96	1.27	0.87	0.90
GDP	ME1250763	0.78	1.59	0.70	0.93
ADP	ME1250727	0.81	1.35	0.84	1.01
CMP	ME1250749	0.71	1.51	0.83	0.95
NADH	ME1250789	0.79	1.43	0.88	0.90
cytidine	ME1250755	1.38	1.32	0.87	0.43
dihydroxyacetone_phosphate	ME1250756	1.42	1.32	0.66	0.60
glyceraldehyde_3.phosphate	ME1250767	1.42	1.31	0.66	0.60
F6P_or_G1P	ME1250758	1.21	1.63	0.59	0.58
CDP.choline	ME1250744	1.50	1.56	0.46	0.48
IMP	ME1250778	1.32	1.80	0.48	0.40
Sedoheptulose.7.phosphate	ME1250806	1.37	1.70	0.47	0.45
AMP	ME1250730	0.67	2.17	0.49	0.68
succinate	ME1250808	0.75	1.88	0.66	0.71
Glycerol.3.Phosphate	ME1250769	0.85	2.38	0.35	0.43
GMP	ME1250772	0.54	2.52	0.44	0.50

Factors:

F1	Sample source:SEM leukemia cells \| guideRNA:BCS \| overexpression:AOX
F2	Sample source:SEM leukemia cells \| guideRNA:BCS \| overexpression:RFP
F3	Sample source:SEM leukemia cells \| guideRNA:Vehicle \| overexpression:AOX
F4	Sample source:SEM leukemia cells \| guideRNA:Vehicle \| overexpression:RFP

Data matrix