Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for Rice Infection Study (Study ST000007)

GCMS positive ion mode (Analysis AN000021)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7
butyrolactam NIST	ME642686	0.66	0.32	0.37	4.65	0.31	0.34	0.23
pipecolic acid	ME642777	0.49	3.22	0.80	0.67	0.38	0.43	0.84
5-hydroxynorvaline NIST	ME642663	2.32	1.74	0.92	0.43	0.42	0.94	0.66
pantothenic acid	ME642769	2.56	0.96	0.59	1.72	0.85	0.44	0.40
pyruvate	ME642782	2.81	0.82	0.65	0.80	1.19	0.73	0.60
galactose	ME642710	0.28	0.66	1.17	1.66	0.35	2.21	0.43
5-methoxytryptamine	ME642664	0.62	1.44	2.18	1.47	0.17	0.65	0.34
glycine	ME642724	0.33	1.10	2.08	0.37	0.74	0.93	1.23
lysine	ME642750	0.36	1.28	2.52	0.53	0.50	1.14	0.45
citrulline	ME642693	0.32	1.32	2.42	0.29	0.70	1.02	0.70
ornithine	ME642765	0.42	1.30	2.59	0.43	0.70	0.75	0.61
2-phenylpropanol NIST	ME642660	1.56	1.53	0.06	0.07	1.24	1.39	1.34
acetophenone NIST	ME642667	1.48	0.81	0.01	0.00	1.85	1.64	1.37
oxalic acid	ME642766	1.03	0.24	0.51	0.16	1.79	1.70	1.58
lactic acid	ME642741	0.63	0.64	0.64	0.73	1.86	1.16	1.23
threonic acid	ME642798	0.75	0.57	0.63	0.67	1.29	1.05	1.96
allantoin	ME642672	0.44	1.00	0.65	2.00	0.40	1.12	1.20
N-acetylglutamate	ME642761	0.58	0.75	0.79	2.73	0.65	0.75	0.61
oxoproline	ME642767	0.72	0.97	0.86	2.16	0.60	0.85	0.74
glutamine	ME642718	0.55	1.01	1.47	0.28	0.70	0.98	1.87
cysteine	ME642694	0.54	0.36	0.57	1.44	1.58	1.68	0.68
1-tridecanol NIST	ME642656	1.62	0.80	0.74	2.02	0.55	0.79	0.68
propane-1,3-diol NIST	ME642779	1.69	1.12	1.70	1.20	0.33	0.90	0.28
raffinose	ME642784	1.45	1.08	1.26	1.46	0.69	0.53	0.68
phenol	ME642772	1.54	0.65	1.71	0.33	0.92	0.92	1.10
pelargonic acid	ME642770	0.90	1.53	1.05	1.13	0.96	0.76	0.64
tocopherol	ME642800	0.94	1.39	1.05	1.24	0.93	0.61	0.83
aconitic acid	ME642668	0.65	1.27	1.06	1.69	0.63	0.67	0.92
dehydroascorbate	ME642695	0.84	1.42	0.99	1.57	0.71	0.59	0.84
fumaric acid	ME642705	0.51	1.45	1.12	1.88	0.84	0.46	0.57
maleic acid	ME642752	0.55	1.69	1.16	1.51	0.90	0.37	0.67
arginine + ornithine	ME642678	0.52	1.53	1.59	0.82	0.52	0.81	1.05
diacetone alcohol NIST	ME642696	1.11	1.67	1.62	0.88	0.48	0.54	0.75
alanine-alanine	ME642671	1.77	0.70	1.08	0.44	1.28	1.29	0.69
phosphoric acid	ME642775	1.31	0.62	0.60	0.73	1.64	1.39	0.82
isoleucine	ME642737	0.60	0.85	1.79	1.48	0.67	1.24	0.24
valine	ME642805	1.01	0.83	1.44	0.83	0.85	1.45	0.59
methionine	ME642757	0.67	1.02	1.54	0.75	0.99	1.20	0.72
arabinose	ME642674	0.77	0.97	1.27	0.84	1.10	1.14	0.84
beta-alanine	ME642683	0.87	0.97	1.34	0.82	0.89	1.10	0.97
tyrosine	ME642803	0.68	1.16	1.80	0.55	0.86	1.13	0.72
leucine	ME642744	0.71	1.25	1.61	0.87	0.79	1.34	0.34
phenylalanine	ME642773	0.56	1.07	1.98	0.91	0.75	1.18	0.40
putrescine	ME642780	0.48	0.96	1.78	1.02	0.92	1.07	0.59
citric acid	ME642692	0.68	1.33	0.92	0.84	0.76	0.88	1.50
cellobiose	ME642688	0.79	1.09	1.34	0.99	0.81	0.64	1.27
4-hydroxyphenyl-2-ethylglucopyranoside NIST	ME642662	0.59	1.11	0.89	1.05	1.03	0.94	1.25
isothreonic acid	ME642740	0.66	1.06	1.10	0.90	1.01	0.84	1.30
xylose	ME642808	0.86	0.98	1.00	0.85	1.11	0.88	1.28
1,2-anhydro-myo-inositol NIST	ME642655	0.72	1.26	1.32	0.83	0.97	0.83	0.98
fructose	ME642703	0.71	1.27	1.33	0.69	1.03	0.81	1.07
glucose	ME642714	0.68	1.33	1.30	0.68	0.99	0.82	1.09
galactonic acid	ME642709	0.90	1.21	1.03	0.84	0.94	0.95	1.10
glyceric acid	ME642719	0.80	1.22	1.14	0.63	0.94	0.82	1.38
ribitol	ME642785	0.84	1.24	1.08	0.71	1.01	0.78	1.28
quinic acid	ME642783	0.97	1.50	1.16	0.42	0.62	0.65	1.66
shikimic acid	ME642791	1.13	1.20	0.85	0.47	0.85	0.88	1.66
glycolic acid	ME642725	0.85	0.70	0.92	0.96	1.35	1.16	1.00
erythronic acid	ME642700	0.71	0.77	0.95	1.05	1.25	0.92	1.26
erythronic acid lactone	ME642701	0.85	0.91	0.78	1.01	1.15	1.10	1.15
inositol myo-	ME642731	0.84	0.91	0.80	1.07	1.00	1.15	1.18
aspartic acid	ME642680	1.04	0.92	0.82	0.55	1.37	1.09	1.23
capric acid	ME642687	1.07	1.06	0.62	0.40	1.05	1.37	1.46
malate	ME642751	0.90	1.06	0.77	0.52	1.06	1.21	1.44
hydroxylamine	ME642729	1.19	1.01	1.29	0.56	0.97	1.07	0.98
benzylalcohol	ME642682	1.19	0.76	1.18	0.75	1.17	0.97	1.04
glutamic acid	ME642717	1.01	0.82	1.03	0.69	1.14	1.14	1.07
pyrazine 2,5-dihydroxy NIST	ME642781	1.04	0.98	1.01	0.70	1.05	1.03	1.20
urea	ME642804	0.94	0.86	0.91	0.62	1.40	1.37	0.88
adenosine-5-monophosphate	ME642669	0.96	0.64	1.08	0.55	1.36	1.42	0.99
glucose-6-phosphate	ME642716	1.19	0.64	0.93	0.55	1.24	1.51	1.00
glycerol-alpha-phosphate	ME642722	1.46	0.58	0.83	0.63	1.34	1.24	1.08
inositol-4-monophosphate	ME642732	1.14	0.64	0.93	0.61	1.20	1.28	1.25
melibiose	ME642755	1.63	1.17	1.00	0.75	0.97	1.09	0.60
salicylic acid	ME642789	1.69	0.99	1.03	0.63	0.94	0.98	0.98
cis-sinapinic acid	ME642691	2.00	0.84	0.84	0.80	0.81	1.29	0.75
methanolphosphate	ME642756	1.66	0.93	0.97	0.85	0.79	1.19	0.84
trans-sinapinic acid	ME642801	1.55	0.77	0.79	0.98	0.95	1.27	0.87
inulotriose 1	ME642734	1.85	1.07	1.16	1.05	0.67	0.66	0.82
alanine	ME642670	1.67	0.87	0.78	1.41	1.03	0.71	0.76
alpha ketoglutaric acid	ME642673	1.61	0.92	0.88	0.97	1.08	0.89	0.85
glycerol-3-galactoside NIST	ME642721	1.77	1.10	0.93	1.08	0.97	0.72	0.70
galactinol isomer	ME642708	1.32	1.36	0.98	1.17	0.73	0.80	0.76
idonic acid NIST	ME642730	1.07	1.29	0.80	1.01	0.73	1.06	1.06
proline	ME642778	1.13	1.24	0.98	0.97	0.79	0.99	0.95
guanosine	ME642726	1.35	1.14	1.22	0.99	0.72	0.91	0.78
beta-gentiobiose	ME642684	1.10	1.26	1.17	0.90	0.84	0.97	0.81
GABA	ME642706	1.18	1.05	1.20	0.84	0.81	0.95	0.97
2-palmitoleic acid	ME642659	0.92	1.16	1.18	1.38	0.97	0.75	0.61
phytol	ME642776	1.00	1.07	1.12	1.39	0.98	0.72	0.71
glucoheptulose	ME642712	1.00	1.17	1.17	1.16	0.82	0.98	0.70
monopalmitin-1-glyceride	ME642758	1.00	1.08	1.33	1.13	0.93	0.84	0.69
gamma-tocopherol	ME642711	0.84	0.87	1.18	1.14	1.10	0.88	0.93
lactobionic acid	ME642742	0.83	0.97	1.10	1.20	1.06	0.94	0.84
glycerol	ME642720	0.90	0.94	1.27	1.27	1.02	0.79	0.77
hydroxycarbamate NIST	ME642728	0.97	0.82	1.14	1.36	0.96	0.81	0.92
octadecanol	ME642763	0.97	0.99	0.95	1.11	1.21	0.92	0.84
iso-galactinol	ME642736	1.03	1.06	1.05	1.10	1.07	0.75	0.95
lauric acid	ME642743	0.90	1.09	1.02	1.03	1.08	0.88	0.96
N-acetyl-D-mannosamine	ME642760	0.91	0.94	1.07	1.22	0.88	0.94	1.01
serine	ME642790	0.86	0.94	1.08	1.14	0.88	1.08	0.98
2-deoxyerythritol NIST	ME642657	0.93	0.98	1.19	0.95	1.01	0.91	1.01
threonine	ME642799	1.02	0.96	1.04	0.98	0.97	1.05	0.99
enolpyruvate NIST	ME642698	1.03	1.15	1.14	0.91	1.13	0.94	0.71
fucose 1 + rhamnose 2	ME642704	1.14	1.12	1.11	0.94	1.08	1.17	0.48
arbutin	ME642677	1.21	0.98	0.96	1.44	0.83	0.92	0.73
sorbitol	ME642792	1.21	0.88	1.14	1.46	0.86	0.88	0.64
galactinol	ME642707	1.33	0.88	1.18	1.31	0.99	0.89	0.54
stigmasterol	ME642794	1.37	0.97	0.99	1.29	0.95	0.89	0.66
phosphoethanolamine	ME642774	1.07	1.01	0.80	1.09	1.08	1.17	0.81
arachidic acid	ME642676	1.15	1.07	0.97	1.25	0.92	0.95	0.75
beta-sitosterol	ME642685	1.14	0.96	0.95	1.24	0.99	0.96	0.81
stearic acid	ME642793	1.15	0.96	0.96	1.26	0.96	0.94	0.81
oleic acid	ME642764	1.12	1.15	1.03	1.11	0.90	1.02	0.71
pentadecanoic acid	ME642771	1.14	1.07	1.04	1.08	1.03	0.97	0.71
sucrose	ME642796	1.13	0.99	1.03	0.96	1.16	1.00	0.78
ferulic acid	ME642702	1.14	0.95	0.95	1.07	1.03	1.06	0.83
4-hydroxycinnamic acid	ME642661	1.19	1.00	0.99	1.08	1.05	0.88	0.88
benzoic acid	ME642681	1.21	0.87	1.00	1.09	1.06	0.96	0.87
glucose-1-phosphate	ME642715	1.27	1.08	1.02	0.88	0.98	0.99	0.87
leucrose	ME642745	1.30	1.07	0.82	1.02	0.92	1.03	0.94
linoleic acid	ME642748	1.31	1.12	1.00	1.17	0.87	0.89	0.73
isolinoleic acid NIST	ME642738	1.45	1.06	0.90	1.04	0.93	0.94	0.84
linolenic acid	ME642749	1.35	1.08	0.94	1.09	0.95	0.88	0.82
cerotic acid	ME642690	1.30	0.93	0.97	1.10	0.98	1.01	0.81
lignoceric acid	ME642747	1.33	0.98	0.95	1.06	0.97	0.99	0.82
heptadecanoic acid	ME642727	1.27	1.07	0.96	1.07	0.96	0.95	0.80
palmitic acid	ME642768	1.24	1.07	0.97	1.05	1.01	0.92	0.81
elaidic acid	ME642697	1.25	1.07	0.90	1.13	0.99	0.98	0.77
levoglucosan	ME642746	1.22	1.05	0.96	1.09	0.99	0.99	0.77
6-deoxyglucitol NIST	ME642665	1.31	0.69	0.90	1.28	1.09	1.28	0.55
mannitol	ME642753	1.31	0.73	1.17	0.89	1.23	1.20	0.57
erythritol	ME642699	1.06	0.53	1.11	1.06	1.31	1.27	0.68
threitol	ME642797	1.29	0.52	1.08	0.98	1.33	1.29	0.61
arabitol	ME642675	0.96	0.66	1.07	1.01	1.11	1.37	0.80
xylitol	ME642807	1.09	0.67	1.14	0.96	1.02	1.38	0.78
vanillic acid	ME642806	1.37	0.81	0.99	0.98	0.97	1.16	0.83
asparagine	ME642679	1.18	0.90	1.06	1.01	0.98	1.21	0.71
montanic acid	ME642759	1.20	0.85	0.97	1.01	1.03	1.22	0.78
ribose	ME642787	1.18	0.76	1.18	0.91	1.15	1.05	0.82
N-methylalanine	ME642762	1.07	0.79	1.15	1.07	0.99	1.12	0.83
xylulose NIST	ME642809	1.07	0.81	1.07	1.07	0.99	1.08	0.93
2-hydroxyglutaric acid	ME642658	1.37	0.77	0.92	1.16	1.01	0.89	0.99
succinic acid	ME642795	1.37	0.84	0.69	1.44	0.91	0.86	1.02
gluconic acid	ME642713	1.23	0.85	0.80	0.99	0.93	1.13	1.15
glycerol-beta-phosphate	ME642723	1.28	0.87	0.83	0.89	1.18	1.09	0.95
inulobiose	ME642733	1.25	0.67	0.72	1.10	1.27	1.18	0.89
isocitric acid	ME642735	1.29	1.41	0.76	1.05	0.60	1.20	0.79
mannonic acid NIST	ME642754	0.86	1.38	0.91	0.79	0.81	1.22	0.99
ribonic acid	ME642786	1.04	1.07	0.90	0.73	0.86	1.29	1.13
acetohydroxamic acid	ME642666	1.05	0.69	1.43	1.62	0.85	0.78	0.60
isonicotinic acid	ME642739	0.92	0.77	1.15	1.54	1.03	0.96	0.60
salicin	ME642788	1.10	0.80	1.03	1.47	1.29	0.82	0.51
cellobiotol	ME642689	0.84	0.99	0.83	1.46	0.83	1.06	0.94
trehalose	ME642802	0.82	0.70	0.92	1.57	0.81	1.48	0.64

Factors:

F1	genotype:Taipei 309 +Xa21 transgene \| Xoo infection:mock
F2	genotype:Taipei 309 +Xa21 transgene \| Xoo infection:no treatment
F3	genotype:Taipei 309 +Xa21 transgene \| Xoo infection:Pxo99
F4	genotype:Taipei 309 +Xa21 transgene \| Xoo infection:RaxSt
F5	genotype:Taipei 309 \| Xoo infection:mock
F6	genotype:Taipei 309 \| Xoo infection:no treatment
F7	genotype:Taipei 309 \| Xoo infection:Pxo99

Data matrix