Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for GBM Cell Lines Reproducibility Pilot Study (Study ST000301)

HILIC-MS Negative mode (Analysis AN000479)

Metabolite	Structure	F1	F2	F3	F4
LAC_13C_1	ME108324	3.01	0.28	NA	1.86
NADH_13C_5	ME108347	0.48	1.59	NA	0.18
6PG_13C_5	ME108255	0.40	2.09	NA	0.11
6PG_13C_6	ME108256	0.46	2.36	NA	0.17
6PG_13C_4	ME108254	0.63	2.35	NA	0.62
6PG	ME108250	0.46	2.10	NA	0.44
FBP_13C_6	ME108301	0.57	1.79	NA	0.63
R5P/X5P_13C_5	ME108357	0.65	1.92	NA	0.43
S7P	ME108358	0.70	1.88	NA	0.42
AMP_13C_1	ME108267	0.72	1.75	NA	1.45
NAD_13C_3	ME108339	NA	1.15	NA	0.93
GTP_13C_1	ME108384	NA	0.19	NA	1.81
R5P/X5P_13C_3	ME108355	0.02	0.01	NA	1.49
NAD_13C_1	ME108337	0.86	NA	NA	1.19
2PG/3PG	ME108246	0.90	0.49	NA	1.45
ASP	ME108272	0.96	0.30	NA	1.74
GLU_13C_5	ME108322	1.12	0.84	NA	0.13
MAL_13C_3	ME108330	1.37	1.48	NA	0.15
CIT/ICIT_13C_3	ME108286	1.19	1.53	NA	0.09
SUC_13C_1	ME108367	1.15	1.44	NA	0.11
GLU_13C_4	ME108321	1.70	0.40	NA	0.27
G3P_13C3	ME108305	2.19	0.22	NA	0.50
GLU_13C_3	ME108320	2.12	0.61	NA	0.27
GLU_13C_1	ME108318	1.52	0.37	NA	0.70
NADH_13C_2	ME108344	1.60	0.25	NA	0.85
ATP	ME108277	1.67	0.51	NA	0.83
ADP_13C_3	ME108263	1.63	0.38	NA	0.99
NAD_13C_4	ME108340	1.52	0.47	NA	1.01
GLU_13C_2	ME108319	1.85	0.18	NA	0.97
MAL_13C_2	ME108329	1.82	0.44	NA	0.74
G3P	ME108302	1.87	0.32	NA	0.66
GTP_13C_4	ME108387	1.95	0.35	NA	0.63
GDP_13C_4	ME108375	1.71	1.20	NA	0.63
MAL_13C_1	ME108328	1.45	0.62	NA	0.74
ADP_13C_4	ME108264	1.59	0.86	NA	0.73
GTP_13C_5	ME108388	1.47	0.87	NA	0.67
ATP_13C_2	ME108279	1.47	0.72	NA	0.65
CIT/ICIT_13C_1	ME108284	1.49	0.79	NA	0.69
GTP_13C_3	ME108386	1.52	0.75	NA	0.73
CIT/ICIT_13C_2	ME108285	1.82	0.73	NA	0.45
ATP_13C_3	ME108280	1.68	0.70	NA	0.62
ATP_13C_5	ME108282	1.72	0.65	NA	0.63
ATP_13C_1	ME108278	1.30	0.58	NA	1.14
FBP_13C_5	ME108300	1.47	0.48	NA	1.28
ATP_13C_4	ME108281	1.15	0.44	NA	0.61
ASP_13C_1	ME108273	1.27	0.09	NA	0.75
ASP_13C_2	ME108274	1.18	0.19	NA	0.91
CMP	ME108390	0.89	0.75	NA	1.36
MCOA_13C_1	ME108333	0.64	0.91	NA	1.32
FBP	ME108295	0.77	0.88	NA	1.35
FBP_13C_3	ME108298	0.75	0.94	NA	1.30
FBP_13C_4	ME108299	0.75	0.95	NA	1.30
ADP_13C_1	ME108261	0.45	1.30	NA	1.08
R5P/X5P_13C_4	ME108356	0.43	1.21	NA	1.36
6PG_13C_3	ME108253	0.82	1.71	NA	0.79
S7P_13C_7	ME108365	0.85	1.59	NA	0.56
G3P_13C_1	ME108303	0.68	1.27	NA	0.86
R5P/X5P_13C_1	ME108353	0.77	1.38	NA	0.76
NADH_13C_4	ME108346	0.85	1.21	NA	0.54
G6P/F6P_13C_6	ME108312	0.97	1.33	NA	0.70
Gl-OH3P_13C_3	ME108316	0.94	1.40	NA	0.66
NADH	ME108342	1.00	1.47	NA	0.53
Gl-OH3P_13C_1	ME108314	1.06	1.38	NA	0.50
NAD_13C_5	ME108341	1.16	1.33	NA	0.51
MAL	ME108327	1.26	0.76	NA	0.98
GDP_13C_2	ME108373	1.22	0.76	NA	1.03
TTP	ME108394	1.19	0.76	NA	1.05
GLU	ME108317	1.34	0.70	NA	0.97
GMP	ME108377	1.39	0.72	NA	0.89
ADP	ME108260	1.37	0.82	NA	0.81
GTP	ME108383	1.31	0.82	NA	0.87
NAD	ME108336	1.30	0.81	NA	0.89
SUC	ME108366	1.29	0.83	NA	0.88
UTP	ME108397	1.08	0.83	NA	1.09
CTP	ME108391	1.12	0.84	NA	1.04
CDP	ME108389	1.09	0.89	NA	1.03
G6P/F6P_13C_5	ME108311	1.09	0.86	NA	1.05
CIT/ICIT_13C_6	ME108289	0.94	0.96	NA	1.09
LAC	ME108323	1.02	0.94	NA	1.04
G6P/F6P	ME108306	0.95	1.12	NA	0.93
E4P	ME108290	1.03	1.09	NA	0.88
G6P/F6P_13C_2	ME108308	1.02	1.03	NA	0.95
GDP	ME108371	1.09	0.94	NA	0.97
NADH_13C_1	ME108343	1.18	0.95	NA	0.94
S7P_13C_5	ME108363	1.15	0.92	NA	0.93
S7P_13C_6	ME108364	1.15	0.92	NA	0.93
TMP	ME108393	1.22	0.92	NA	0.85
AMP	ME108266	1.17	0.97	NA	0.86
Gl-OH3P	ME108313	1.19	0.97	NA	0.85
ACOA	ME108257	1.13	1.01	NA	0.82
UMP	ME108396	1.13	0.99	NA	0.88
MCOA	ME108332	1.10	0.98	NA	0.89
UDP	ME108395	1.10	1.00	NA	0.89
CIT/ICIT_13C_5	ME108288	1.41	1.20	NA	0.39
GDP_13C_5	ME108376	1.39	1.18	NA	0.43
ADP_13C_5	ME108265	1.39	1.00	NA	0.61
GDP_13C_3	ME108374	1.30	1.08	NA	0.57
CIT/ICIT	ME108283	1.25	1.03	NA	0.72
LAC_13C_3	ME108326	1.17	1.12	NA	0.68
R5P/X5P	ME108352	1.23	1.21	NA	0.56
2PG/3PG_13C_3	ME108249	1.10	1.25	NA	0.65
NADH_13C_3	ME108345	1.02	1.12	NA	0.61

Factors:

F1	Cell Line:L229
F2	Cell Line:LN18
F3	Cell Line:Pooled glioblastoma
F4	Cell Line:U-138

Data matrix