Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for Metabolomic profiles in P. gingivalis cells treated with pABA (Study ST000384)

CE-TOF MS (Analysis AN000619)

Metabolite	Structure	F1	F2
Vanillic acid	ME133191	NA	1.00
Tyramine	ME133197	NA	1.00
Pimelic acid	ME133189	NA	1.00
p-Aminobenzoic acid	ME133196	NA	1.00
N-6-trimethyllysine	ME133200	NA	1.00
N6-acetyllysine	ME133199	NA	1.00
Maleic acid	ME133187	NA	1.00
Fructose 1,6-diphosphate	ME133194	NA	1.00
Deoxyguanosine	ME133202	NA	1.00
Deoxyadenosine/5^-Deoxyadenosine	ME133201	NA	1.00
CoA_divalent	ME133195	NA	1.00
Biotin	ME133193	NA	1.00
5-Oxo-2-tetrahydrofurancarboxylic acid	ME133188	NA	1.00
3-Hydroxymethylglutaric acid	ME133190	NA	1.00
3-Acetylacrylic acid	ME133186	NA	1.00
2-Isopropylmalic acid	ME133192	NA	1.00
2-(Methylamino)benzoic acid	ME133198	NA	1.00
dCMP	ME133203	0.11	1.89
dAMP	ME133204	0.19	1.81
GDP-mannose/GDP-galactose	ME133205	0.20	1.80
Glucose 6-phosphate	ME133208	0.38	1.62
3-Phosphoglyceric acid	ME133209	0.39	1.61
dTMP	ME133210	0.40	1.60
Citramalic acid	ME133206	0.34	1.66
Glutaric acid	ME133207	0.36	1.64
Cyclohexylamine	ME133220	0.64	1.54
Leucinic acid	ME133219	0.64	1.55
Suberic acid	ME133218	0.55	1.45
5-Oxohexanoic acid	ME133216	0.53	1.47
Malonic acid	ME133215	0.52	1.48
Sedoheptulose 7-phosphate	ME133214	0.49	1.51
Adipic acid	ME133213	0.46	1.54
Fructose 6-phosphate	ME133211	0.45	1.55
Glucose 1-phosphate	ME133212	0.45	1.55
XMP	ME133347	1.00	NA
sn-glycero-3-phosphocholine	ME133355	1.00	NA
Methylimidazoleacetic acid	ME133354	1.00	NA
Hypoxanthine	ME133353	1.00	NA
Gamma-Aminobutyric acid	ME133349	1.00	NA
Fumaric acid	ME133346	1.00	NA
Creatinine	ME133350	1.00	NA
Creatine	ME133352	1.00	NA
1-Aminocyclopropanecarboxylic acid	ME133348	1.00	NA
Agmatine	ME133351	1.00	NA
Pantothenic acid	ME133343	1.28	0.15
N8-Acetylspermidine	ME133340	1.24	0.29
Xanthosine	ME133335	1.21	0.37
His-Glu	ME133237	0.90	1.29
GDP	ME133226	0.72	1.28
2-Phosphoglyceric acid	ME133227	0.73	1.27
CMP	ME133228	0.73	1.27
Hydroxypropionic acid	ME133232	0.77	1.23
Succinic acid	ME133231	0.77	1.23
beta-hydroxybutyric acid	ME133230	0.76	1.24
Citraconic acid	ME133229	0.75	1.25
Phosphoenolpyruvic acid	ME133238	0.83	1.17
Levulinic acid	ME133241	0.86	1.14
Benzoic acid	ME133239	0.84	1.16
Lysine	ME133240	0.85	1.15
dTDP	ME133233	0.76	1.16
Phosphoserine	ME133236	0.81	1.19
Cytosine	ME133234	0.79	1.21
m-Toluic acid	ME133235	0.80	1.20
UDP	ME133217	0.47	1.27
Guanosine	ME133225	0.76	1.36
Guanine	ME133223	0.60	1.27
N-Acetyl-Glucosamine 6-Phosphate	ME133224	0.65	1.35
2-Hydroxyisobutyric acid	ME133221	0.62	1.38
Sebacic acid	ME133222	0.63	1.37
Riboflavin	ME133261	1.00	1.00
NAD+	ME133263	1.01	0.99
Acetyl CoA_divalent	ME133264	1.01	0.99
Glycerol 3-phosphate	ME133262	1.01	0.99
trans-Ferlic acid	ME133257	0.97	1.03
ADP	ME133260	0.99	1.01
PGE2	ME133259	0.98	1.02
Undecylic acid	ME133258	0.98	1.02
Thiamine	ME133253	0.95	1.05
Tiglic acid	ME133254	0.96	1.05
DL-2-hydroxy valeric acid	ME133256	0.96	1.04
Hydrocinnamic acid	ME133255	0.96	1.04
Cyclohexanecarboxylic acid	ME133250	0.93	1.07
Ketoleucine/3-Methyl-2-oxovaleric acid	ME133251	0.94	1.06
Mannosamine	ME133252	0.94	1.06
AMP	ME133243	0.88	1.12
Glycolic acid	ME133242	0.88	1.12
2-Carboxybenzaldehyde	ME133249	0.92	1.08
β-Ala-Lys	ME133248	0.92	1.08
Threonine	ME133244	0.91	1.09
Quinic acid	ME133246	0.91	1.09
ADP-glucose/GDP-fucose	ME133247	0.91	1.09
Glutamine	ME133245	0.91	1.09
Gly-Gly	ME133292	1.11	0.68
Malic acid	ME133272	1.08	0.92
NADP+	ME133273	1.09	0.91
Lactic acid	ME133275	1.09	0.91
Heptylic acid	ME133276	1.09	0.91
Caprylic acid	ME133274	1.09	0.91
Diethanolamine	ME133277	1.09	0.91
Thiamine phosphate	ME133265	1.04	0.96
Ala-Ala	ME133271	1.07	0.93
Pelargonic acid	ME133270	1.07	0.93
Lauric acid	ME133267	1.06	0.94
FAD_divalent	ME133266	1.06	0.94
Azelaic acid	ME133268	1.06	0.94
Capric acid	ME133269	1.06	0.94
Adenine	ME133290	1.20	0.80
Butyric acid	ME133291	1.20	0.80
ppGpp_divalent	ME133289	1.19	0.81
Urea	ME133288	1.18	0.82
Gly-Leu	ME133287	1.18	0.82
Ribulose-5-phosphate	ME133286	1.18	0.82
Pyridoxamine	ME133278	1.11	0.89
Propionic acid	ME133281	1.13	0.87
Caproic acid	ME133279	1.12	0.88
Glyceric acid	ME133280	1.12	0.88
Tyr-Glu	ME133282	1.14	0.86
2,6-diaminopimelic acid	ME133285	1.16	0.84
5-Oxoproline	ME133283	1.15	0.85
Arginine	ME133284	1.15	0.85
Adenosine	ME133342	1.75	0.25
Choline	ME133345	1.87	0.13
Phthalic acid	ME133344	1.84	0.16
Methionine	ME133336	1.54	0.46
UDP-glucuronic acid	ME133334	1.52	0.48
Inosine	ME133332	1.51	0.49
Tyrosine	ME133333	1.51	0.49
β-Alanine	ME133341	1.64	0.36
Tryptophan	ME133337	1.58	0.42
Alanine	ME133339	1.59	0.41
Serine	ME133338	1.59	0.41
Methyl sulfate	ME133320	1.39	0.61
Leucine	ME133319	1.39	0.61
Methionine sulfoxide	ME133318	1.39	0.61
UMP	ME133313	1.36	0.64
S-Adenosylmethionine	ME133317	1.38	0.62
ADP-ribose	ME133314	1.37	0.63
GMP	ME133315	1.37	0.63
Urocanic acid	ME133331	1.48	0.52
Glycine	ME133330	1.47	0.53
Pyridoxal	ME133329	1.46	0.54
Asparagine	ME133321	1.41	0.59
Phenylalanine	ME133322	1.41	0.59
Spermidine	ME133325	1.42	0.58
Glutamic acid	ME133323	1.42	0.58
Isobutyryl CoA_divalent	ME133324	1.42	0.58
Isoleucine	ME133328	1.45	0.55
5^-Methylthioadenosine	ME133326	1.43	0.57
Valine	ME133327	1.44	0.56
Ser-Glu	ME133316	1.28	0.58
Proline	ME133295	1.25	0.75
Isovaleric acid	ME133293	1.24	0.76
Triethanolamine	ME133294	1.24	0.76
Niacinamide	ME133302	1.29	0.71
5-hydroxylysine	ME133300	1.29	0.71
Homoserinelactone	ME133301	1.29	0.71
Carboxymethyllysine	ME133303	1.30	0.70
Ribose-5-phosphate	ME133304	1.30	0.70
Gluconic acid	ME133299	1.28	0.72
Pyridoxamine 5^-phosphate	ME133298	1.28	0.72
Gly-Asp	ME133297	1.27	0.73
Ornithine	ME133296	1.27	0.73
Aspartic acid	ME133312	1.35	0.65
N-Acetylornithine	ME133311	1.34	0.66
Glu-Glu	ME133309	1.33	0.67
Thr-Asp	ME133310	1.33	0.67
Citrulline	ME133306	1.31	0.69
Histidine	ME133305	1.31	0.69
IMP	ME133308	1.32	0.68
Pyridoxine	ME133307	1.32	0.68

Factors:

F1	Treatment:-
F2	Treatment:pABA (1 mg/ml)

Data matrix