Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for Diet, genetics and gut microbiome drive dynamic changes in plasma metabolites [plasma] (Study ST000879)

HILIC POSITIVE ION MODE (Analysis AN001429)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9	F10	F11	F12
CAR(20:4)	ME226826	1.77	0.15	0.22	0.74	0.07	1.86	2.72	0.99	0.10	3.21	0.53	0.14
Trimethylamine N-oxide	ME226869	1.54	2.88	3.56	0.32	0.83	0.66	0.37	0.46	1.47	0.10	0.31	0.10
CAR(9:0)	ME226812	2.35	2.99	2.77	0.64	0.25	0.90	0.48	0.27	0.75	0.27	0.36	0.23
CAR(7:0)	ME226811	1.58	3.45	2.54	0.51	0.41	0.70	0.23	0.31	0.51	0.10	0.72	0.28
CAR(4:0)	ME226806	1.62	3.04	2.09	0.68	0.71	0.68	0.56	0.59	0.57	0.46	0.75	0.44
CAR(6:0)	ME226810	1.65	3.07	2.55	0.55	0.47	0.75	0.54	0.43	0.71	0.45	0.49	0.59
5-Hydroxy-L-tryptophan	ME226787	1.76	0.10	0.36	1.08	0.05	3.69	0.94	0.45	0.95	1.12	0.40	0.70
Serotonin	ME226862	1.73	0.16	0.45	1.06	0.13	3.30	0.89	0.53	0.99	1.10	0.47	0.85
3-Hydroxyanthranilic acid	ME226784	NA	1.13	0.37	NA	1.79	0.38	1.34	0.82	1.10	1.37	1.93	0.24
1-Methylhistamine	ME226781	0.91	0.26	0.40	0.99	0.55	2.32	2.98	0.43	0.91	1.03	0.31	0.66
Histamine	ME226840	2.07	0.20	0.83	1.92	0.08	0.98	2.28	0.88	0.71	0.87	0.36	0.54
C3-DC-CH3 carnitine	ME226805	1.85	0.35	0.31	1.62	0.49	0.79	2.70	0.57	0.38	1.60	0.79	0.26
Niacinamide	ME226849	1.19	0.68	0.49	1.44	0.60	1.11	2.46	0.95	0.51	1.44	0.51	0.38
sn-glycero-3-phosphocholine	ME226794	0.92	0.53	0.38	1.56	0.52	1.06	2.46	1.23	0.51	1.51	0.71	0.35
Choline phosphate	ME226853	1.17	0.32	0.53	1.19	0.63	1.44	2.07	1.21	0.67	1.21	0.74	0.61
Phosphoethanolamine	ME226854	1.13	0.38	0.48	1.69	0.64	1.45	2.06	0.85	0.55	1.23	0.70	0.61
5-amino-levulinic acid	ME226786	0.99	1.46	1.55	0.51	1.09	1.06	0.55	0.61	1.19	0.46	0.83	1.88
cis-3-hydroxyproline	ME226868	0.99	1.46	1.55	0.51	1.09	1.06	0.55	0.61	1.19	0.46	0.83	1.88
N-acetylglycine	ME226789	0.51	0.66	1.47	0.57	0.41	1.47	0.60	0.50	1.88	0.45	0.42	2.80
Thymidine	ME226866	0.51	0.61	1.99	0.51	0.82	1.57	0.59	0.56	1.94	0.49	0.57	2.04
S-Adenosylhomocysteine	ME226785	0.81	2.23	0.97	1.45	1.31	0.45	0.32	0.91	0.47	0.41	1.82	0.43
Adenosine	ME226790	1.54	0.30	0.74	1.25	0.41	2.25	0.98	1.19	0.57	0.62	0.76	1.18
Xanthosine	ME226873	1.30	1.06	1.35	2.29	0.38	1.71	0.61	1.04	0.37	0.67	0.57	0.57
Anserine	ME226796	0.85	0.42	1.06	1.00	1.86	1.68	1.27	0.41	1.30	0.68	0.62	1.08
Carnosine	ME226827	0.60	0.44	1.29	0.88	2.21	1.91	0.87	0.38	1.39	0.51	0.60	1.30
Aminoisobutyric acid	ME226795	0.02	0.80	1.24	0.87	1.45	2.06	1.21	1.10	1.36	0.54	0.39	1.12
Ureidopropionic acid	ME226848	0.47	0.55	1.08	1.22	1.16	1.58	0.78	0.90	1.46	0.74	0.91	1.19
CAR(14:1)	ME226818	1.26	0.85	1.39	1.39	0.81	0.74	0.92	0.85	1.03	1.14	0.63	1.04
CAR(14:2)	ME226819	1.20	0.78	1.44	1.43	0.81	0.78	0.82	0.79	1.13	1.04	0.65	1.19
CAR(12:0)	ME226815	1.44	0.88	1.44	1.44	0.74	0.68	0.96	0.80	0.93	1.19	0.61	0.94
CAR(14:0)	ME226817	1.32	0.86	1.32	1.33	0.70	0.79	1.03	0.70	1.02	1.25	0.59	1.10
CAR(10:0)	ME226813	1.41	0.96	1.76	1.31	0.63	0.94	0.78	0.71	1.16	0.89	0.56	0.99
CAR(12:1)	ME226816	1.59	0.80	1.63	1.52	0.65	0.74	0.79	0.70	1.08	1.01	0.49	1.07
CAR(16:0)	ME226820	1.04	0.66	1.31	1.10	0.65	1.14	0.98	0.66	1.31	1.04	0.58	1.51
CAR(18:1)	ME226823	0.81	0.50	1.23	1.38	0.77	1.03	1.08	0.76	1.25	1.15	0.66	1.39
CAR(18:2)	ME226825	0.96	0.52	1.29	1.44	0.75	1.02	0.96	0.64	1.30	1.15	0.57	1.41
CAR(16:0(OH))	ME226821	1.38	0.55	1.03	1.44	0.48	0.96	1.37	0.63	1.20	1.38	0.45	1.00
CAR(18:1(OH))	ME226824	0.98	0.48	1.06	1.52	0.65	0.90	1.47	0.73	1.23	1.31	0.53	1.06
1-methyl nicotinamide	ME226782	1.11	1.12	1.00	1.44	0.90	1.50	1.31	0.44	0.67	1.38	0.44	0.67
CAR(4:0(OH))	ME226807	1.49	0.84	1.37	1.48	0.64	0.84	1.58	0.62	0.66	1.24	0.70	0.56
CAR(DC3:0)	ME226804	2.00	0.68	0.74	1.35	0.91	0.81	2.02	0.69	0.54	1.05	0.68	0.44
Arginine	ME226798	0.59	1.51	1.46	0.98	1.67	0.65	0.76	0.66	0.90	0.54	1.65	0.91
Kynurenic acid	ME226843	1.21	1.06	0.76	0.94	2.37	0.77	0.70	0.84	0.90	0.81	1.26	0.66
CAR(18:0)	ME226822	0.67	0.50	0.74	1.36	1.06	0.95	1.18	1.03	1.12	1.25	1.07	1.03
Taurine	ME226863	1.03	0.68	0.68	1.28	1.13	0.99	1.70	0.96	0.65	1.22	0.92	0.71
Cytosine	ME226833	0.95	0.64	0.77	1.18	1.19	0.85	1.69	0.99	0.86	0.93	0.95	1.00
Deoxycytidine	ME226783	0.88	0.59	0.70	1.27	1.28	0.82	1.77	1.00	0.87	0.91	0.92	0.97
Gamma-Aminobutyric acid	ME226835	1.23	1.13	0.52	1.14	1.17	1.21	1.32	1.10	0.38	1.18	1.20	0.34
2-Aminobenzoic acid	ME226797	0.96	0.65	0.56	1.58	1.17	1.03	1.45	1.22	0.82	1.25	0.97	0.30
Glutamic acid	ME226837	1.33	0.68	0.60	1.24	0.74	1.04	1.70	1.06	0.52	1.38	1.09	0.44
Citrulline	ME226829	0.66	1.19	1.07	0.87	1.56	1.09	0.86	0.86	1.02	0.72	1.34	0.93
Asparagine	ME226799	0.70	0.89	0.68	1.03	1.43	0.94	0.90	1.06	0.96	0.82	1.56	1.06
Serine	ME226861	0.73	1.19	0.82	0.95	1.42	0.94	0.89	1.06	0.94	0.76	1.44	0.93
Alanine	ME226792	0.89	0.97	0.70	1.09	1.50	0.89	1.03	1.00	1.04	0.88	1.37	0.70
Valine	ME226872	0.70	0.84	0.72	1.04	1.55	0.89	0.96	1.12	0.85	1.17	1.56	0.69
Isoleucine	ME226842	0.75	0.81	0.82	1.13	1.35	0.96	0.99	1.04	0.88	1.19	1.37	0.76
Leucine	ME226844	0.84	0.92	0.72	1.19	1.40	0.88	1.01	1.08	0.76	1.21	1.38	0.63
Threonine	ME226865	0.65	1.00	0.60	0.87	1.76	0.78	0.93	1.22	0.93	1.00	1.70	0.64
Tyrosine	ME226871	0.65	0.86	0.74	1.02	1.86	0.90	0.84	1.17	0.91	1.02	1.45	0.72
Lysine	ME226845	0.52	0.76	0.66	0.97	1.63	0.96	0.86	1.23	0.90	0.88	1.95	0.77
Proline	ME226856	0.64	0.87	0.81	0.88	1.63	1.01	0.88	1.05	1.11	0.79	1.66	0.78
Ornithine	ME226851	0.97	1.05	0.82	1.06	0.82	0.95	1.01	1.39	0.63	1.14	1.36	0.69
Glucose	ME226836	0.74	1.07	1.10	0.73	0.97	1.20	1.01	1.14	1.21	0.60	1.31	0.94
Allantoin	ME226793	1.01	1.16	1.20	0.77	1.46	0.85	0.92	0.81	1.28	0.84	0.83	1.03
Glycine	ME226839	0.96	1.25	1.08	1.04	0.90	1.05	0.99	0.87	0.92	0.78	0.98	1.18
Glutamine	ME226838	0.91	0.93	1.40	0.96	0.93	1.12	0.84	0.83	0.97	0.83	0.98	1.37
Pyroglutamic acid	ME226858	0.91	0.94	1.47	0.93	0.92	1.13	0.83	0.82	0.98	0.80	0.98	1.40
Choline	ME226828	0.99	0.84	0.98	1.50	0.81	1.05	1.18	1.11	0.81	1.01	0.86	0.80
Pipecolic acid	ME226855	1.03	1.04	1.13	1.02	1.34	0.65	1.07	1.07	0.75	0.92	1.17	0.93
Symmetric dimethyl-L-arginine	ME226860	1.06	0.93	0.95	1.22	1.25	0.93	1.09	0.93	0.89	0.96	0.96	0.88
Dimethylarginine	ME226791	1.01	1.02	0.97	1.04	1.26	0.93	0.96	0.92	1.00	0.90	1.08	0.95
Phenylalanine	ME226852	0.96	1.02	1.01	1.13	1.12	1.10	0.88	0.96	1.02	0.96	1.01	0.85
phenylalanine-d8	ME226779	1.02	1.02	1.00	0.97	1.02	1.03	1.03	0.98	1.05	0.94	0.93	1.00
valine-d8	ME226780	0.96	1.03	0.96	1.02	1.06	0.98	1.02	1.02	0.97	0.99	1.01	0.96
Histidine	ME226841	0.80	1.00	1.02	1.15	1.09	0.91	0.92	1.06	0.92	0.95	1.30	0.90
Tryptophan	ME226870	0.94	1.08	0.89	0.99	1.27	0.93	0.83	1.19	0.90	1.01	1.23	0.78
Putrescine	ME226857	0.86	0.68	0.96	1.08	1.18	1.22	1.12	0.78	1.02	1.08	0.95	1.09
Creatine	ME226831	1.15	0.84	0.92	0.99	1.14	1.16	1.29	0.79	0.99	0.84	1.17	0.74
Sarcosine	ME226859	1.12	0.84	0.98	0.96	1.13	1.15	1.26	0.78	1.02	0.79	1.19	0.80
CAR(10:2)	ME226814	1.31	1.07	1.24	1.23	0.96	0.69	0.91	1.12	0.85	0.99	0.87	0.80
Creatinine	ME226832	1.32	1.12	1.10	1.10	1.09	0.95	1.17	0.70	1.01	0.87	0.74	0.88
Acetylcholine	ME226788	1.97	1.78	1.44	0.89	0.83	0.67	0.94	0.84	0.65	0.69	0.74	0.61
CAR(2:0)	ME226802	1.48	1.68	1.56	0.90	0.81	0.70	1.03	0.88	0.71	0.85	0.81	0.69
Carnitine	ME226801	1.38	1.70	1.24	0.89	0.92	0.81	0.91	1.06	0.70	0.76	1.03	0.65
Betaine	ME226800	1.15	1.52	1.40	1.00	0.95	0.95	0.89	0.81	0.92	0.82	0.74	0.93
Thiamine	ME226864	1.13	1.30	1.45	1.08	1.10	1.29	0.68	0.81	0.97	0.66	0.79	0.87
NMMA	ME226850	1.14	1.84	1.28	0.78	1.15	0.83	0.75	0.90	0.81	0.72	1.03	0.87
Thyroxine	ME226867	1.48	1.64	1.21	0.94	1.00	0.86	0.75	0.79	1.10	0.49	0.94	0.85
Cotinine	ME226830	1.95	1.43	0.68	0.84	0.78	0.65	0.86	0.80	0.88	1.06	1.35	0.60
CAR(5:0)	ME226808	1.40	2.23	0.66	0.91	1.61	0.39	0.84	1.12	0.28	0.88	1.53	0.21
Methionine	ME226846	0.94	1.67	0.78	0.86	1.49	0.81	0.79	1.10	0.87	0.84	1.31	0.60
CAR(3:0)	ME226803	1.31	2.06	1.06	1.02	1.22	0.69	0.69	1.16	0.45	0.82	1.23	0.35
Dimethylglycine	ME226834	1.15	1.91	1.04	0.95	1.36	0.70	0.86	1.00	0.62	0.82	1.12	0.57
CAR(5:1)	ME226809	1.51	1.26	0.74	0.98	1.50	0.47	1.21	0.94	0.65	1.09	1.27	0.44
Methionine sulfoxide	ME226847	1.29	1.61	0.64	1.24	1.24	0.75	1.04	0.68	0.70	0.97	1.37	0.46

Factors:

F1	Diet:Chow \| Treatment:none \| Strain:129Jax
F2	Diet:Chow \| Treatment:none \| Strain:129Tac
F3	Diet:Chow \| Treatment:none \| Strain:B6Jax
F4	Diet:HFD \| Treatment:metronidazole \| Strain:129Jax
F5	Diet:HFD \| Treatment:metronidazole \| Strain:129Tac
F6	Diet:HFD \| Treatment:metronidazole \| Strain:B6Jax
F7	Diet:HFD \| Treatment:placebo \| Strain:129Jax
F8	Diet:HFD \| Treatment:placebo \| Strain:129Tac
F9	Diet:HFD \| Treatment:placebo \| Strain:B6Jax
F10	Diet:HFD \| Treatment:vancomycin \| Strain:129Jax
F11	Diet:HFD \| Treatment:vancomycin \| Strain:129Tac
F12	Diet:HFD \| Treatment:vancomycin \| Strain:B6Jax

Data matrix