Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for Arabidopsis Nit1 knockout metabolomics (Study ST001062)

Reversed phase POSITIVE ION MODE (Analysis AN001738)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
TAG 52:9; TAG 16:3_18:3_18:3;	ME258471	1.27	1.25	0.98	0.74	0.61	1.15
TAG 56:8; TAG 18:2_18:3_20:3;	ME258477	1.63	1.52	0.96	0.40	0.56	0.90
TAG 52:4; TAG 16:0_18:2_18:2;	ME258469	1.53	1.87	0.45	0.76	0.66	0.50
TG(50:1)	ME258480	1.64	1.74	0.51	0.60	0.75	0.56
TG(54:6)	ME258495	1.54	1.32	0.78	0.73	0.73	0.69
TG(50:5)	ME258482	1.36	1.45	0.55	0.92	0.84	0.65
TG(60:6)	ME258513	1.39	1.56	0.52	0.82	1.01	0.54
TG(50:3)	ME258481	1.29	2.26	0.54	0.68	0.70	0.56
TG(52:6)	ME258489	1.10	2.20	0.77	0.57	0.80	0.84
DGDG 36:3; DGDG 18:1-18:2;	ME258389	0.85	2.01	0.76	1.05	0.72	0.69
TG(52:5)	ME258488	1.33	1.86	0.66	0.69	0.70	0.75
DAG 34:6; DAG 16:3-18:3;	ME258368	1.05	1.88	0.71	0.82	0.86	0.79
TG(50:6)	ME258483	1.12	1.64	0.88	0.78	0.86	0.82
DG(36:2)	ME258376	0.68	1.65	0.57	1.14	1.63	0.49
SQDG 36:2; SQDG 18:0-18:2;	ME258465	1.00	1.83	0.39	1.04	1.33	0.38
Cer-NDS d34:0; Cer-NDS d18:0_16:0;	ME258362	1.05	1.85	0.49	1.03	1.06	0.44
TG(51:5)	ME258484	1.16	1.94	0.36	1.07	0.87	0.41
PE 38:3; PE 20:0-18:3;	ME258452	1.03	0.83	0.82	1.18	1.02	0.95
PE 32:3; PE 14:0-18:3;	ME258445	1.06	0.95	0.90	1.09	1.04	0.84
DGDG 34:4; DGDG 16:2-18:2;	ME258383	0.99	1.03	0.88	1.13	0.96	0.90
PE 36:3; PE 18:1-18:2;	ME258451	1.02	1.06	0.93	1.06	0.99	0.88
PC 34:5; PC 18:2-16:3;	ME258436	1.03	0.73	1.01	1.07	1.11	0.96
PE (36:1)	ME258443	1.09	0.92	1.02	1.04	0.86	0.97
MGDG 38:5; MGDG 20:2-18:3;	ME258407	1.06	0.82	1.12	0.99	0.89	1.09
DGDG 34:5; DGDG 16:2-18:3;	ME258384	1.05	0.81	1.04	1.07	0.90	1.03
PC (36:4)	ME258425	1.00	0.89	1.07	1.05	0.90	1.04
PC (36:5)	ME258426	0.95	0.91	1.11	1.00	1.02	1.06
PC (34:2)	ME258418	0.97	0.95	0.98	1.05	0.98	1.04
PC 38:6; PC 18:3-20:3;	ME258442	1.01	0.90	1.00	1.04	1.02	0.97
PE 42:3; PE 24:0-18:3;	ME258455	0.98	0.92	0.95	1.09	1.05	0.94
DG(32:1)	ME258372	0.96	1.02	1.12	0.98	1.15	0.84
MGDG 36:6; MGDG 18:3-18:3;	ME258403	0.92	0.89	1.05	1.04	1.22	0.90
PC 34:6; PC 16:3-18:3;	ME258437	0.80	0.84	1.22	1.01	1.22	1.07
MGDG 32:6; MGDG 16:3-16:3;	ME258400	0.96	1.03	1.10	0.91	1.02	1.08
DG(34:2)	ME258374	0.88	1.11	1.14	0.91	1.00	1.12
DGDG 34:3; DGDG 16:0-18:3;	ME258382	0.91	1.14	1.11	0.93	1.01	1.04
MGDG 37:5; MGDG 19:2-18:3;	ME258405	0.99	0.86	1.21	0.88	1.10	1.07
PC 32:3; PC 16:0-16:3;	ME258434	0.89	0.93	1.15	0.90	1.17	1.14
PC 36:6; PC 18:3-18:3;	ME258439	0.90	0.99	1.06	0.95	1.12	1.10
DGDG 35:6; DGDG 17:2-18:4;	ME258387	1.01	1.38	0.94	0.92	0.93	0.87
DGDG 36:4; DGDG 18:1-18:3;	ME258390	0.91	1.49	0.79	1.05	0.97	0.81
TG(54:7)	ME258496	1.16	1.24	0.95	0.82	0.86	0.99
SQDG 34:3; SQDG 16:0-18:3;	ME258464	1.01	1.22	0.91	0.96	1.05	0.88
DGDG 34:2; DGDG 16:0-18:2;	ME258381	1.02	1.20	0.82	1.01	0.92	1.01
DGDG 35:3; DGDG 17:0-18:3;	ME258386	1.02	1.11	0.90	0.96	1.03	1.01
Cer(d42:2)	ME258361	0.90	1.17	0.76	1.12	1.17	0.87
DAG 38:0; DAG 18:0-20:0;	ME258369	1.03	0.94	0.71	1.09	1.26	0.86
PE 36:3; PE 18:0-18:3;	ME258450	0.93	1.04	0.77	1.08	1.31	0.84
MGDG 33:6; MGDG 17:2-16:4;	ME258402	1.00	1.03	0.81	1.06	1.23	0.82
PC 33:4; PC 15:1-18:3;	ME258435	1.01	1.10	0.77	1.08	1.22	0.76
DAG 34:0; DAG 16:0-18:0;	ME258365	0.89	1.03	0.89	1.04	1.17	1.03
PC (34:4)	ME258419	0.93	1.09	0.93	1.02	1.31	0.77
PC 32:3; PC 14:0-18:3;	ME258433	0.96	1.11	0.93	1.06	1.13	0.80
PC (p-40:1) or PC (o-40:2)	ME258430	0.86	1.17	0.98	1.01	1.17	0.91
MGDG 36:7; MGDG 18:3-18:4;	ME258404	0.89	1.32	0.89	0.93	1.36	0.75
PE 35:3; PE 17:0-18:3;	ME258449	0.92	1.21	0.77	1.04	1.41	0.69
SQDG 36:3; SQDG 18:0-18:3;	ME258466	0.98	1.42	0.74	0.97	1.28	0.65
DAG 33:3; DAG 15:0-18:3;	ME258364	0.97	1.38	0.83	0.91	1.14	0.87
DGDG 36:3; DGDG 18:0-18:3;	ME258388	0.99	1.39	0.80	0.94	1.18	0.74
PE 32:2; PE 14:0-18:2;	ME258444	1.42	0.85	0.62	1.19	0.82	0.60
SQDG 38:6; SQDG 18:3-20:3;	ME258468	1.37	0.75	0.71	1.25	0.82	0.59
LPC(16:0)	ME258395	1.30	0.94	0.68	1.23	0.72	0.70
LPC(18:1)	ME258396	1.41	0.80	0.73	1.19	0.59	0.79
LPC(18:2)	ME258397	1.32	0.80	0.73	1.25	0.67	0.75
PC (32:1)	ME258413	1.10	0.99	0.72	1.29	0.82	0.75
PC (38:2)	ME258428	1.15	0.93	0.77	1.24	0.89	0.71
PC (35:1)	ME258420	1.16	0.93	0.74	1.17	0.97	0.77
SQDG 34:1; SQDG 16:0-18:1;	ME258463	1.15	0.97	0.82	1.12	0.93	0.77
PC (36:2)	ME258423	1.05	0.94	0.79	1.19	1.09	0.74
PC (37:3)	ME258427	1.12	0.90	0.72	1.22	1.04	0.72
PC 18:2e; PC 16:2e_2:0;	ME258432	1.22	0.75	0.93	1.13	0.67	1.01
DGDG 38:5; DGDG 20:2-18:3;	ME258392	1.16	0.84	0.86	1.23	0.76	0.83
LPC(18:3)	ME258398	1.15	0.86	0.87	1.18	0.81	0.86
DGDG 36:5; DGDG 18:2-18:3;	ME258391	1.03	1.42	0.62	1.10	1.07	0.64
PE 33:1; PE 16:0-17:1;	ME258446	1.06	1.41	0.56	1.06	1.22	0.58
DGDG 32:3; DGDG 16:0-16:3;	ME258380	0.92	1.54	0.54	1.11	1.33	0.53
MGDG 33:5; MGDG 17:2-16:3;	ME258401	1.05	1.39	0.45	1.11	1.38	0.48
PC 18:0e; PC 14:0e_4:0;	ME258431	1.31	1.11	0.50	1.30	0.74	0.54
PC (33:1)	ME258414	1.13	1.23	0.70	1.10	1.04	0.60
PC (35:2)	ME258421	1.09	1.20	0.68	1.17	1.01	0.65
PE 35:2; PE 17:0-18:2;	ME258448	1.13	1.13	0.71	1.14	1.03	0.64
AC(14:2)	ME258354	1.12	1.17	0.62	1.32	0.98	0.42
PC (33:2)	ME258415	1.19	1.08	0.56	1.24	1.01	0.57
PC 35:4; PC 17:2-18:2;	ME258438	1.16	1.22	0.54	1.22	1.01	0.53
PC (30:0)	ME258410	1.21	1.03	0.43	1.38	0.96	0.49
PG 34:2; PG 16:1-18:1;	ME258459	1.28	1.01	0.42	1.23	1.15	0.48
MGDG 32:5; MGDG 16:2-16:3;	ME258399	1.00	1.21	0.51	1.23	1.29	0.57
PC (34:0)	ME258416	1.10	0.93	0.45	1.30	1.32	0.57
PG 34:1; PG 18:0-16:1;	ME258458	1.19	1.03	0.56	1.17	1.12	0.63
PC (32:0)	ME258412	1.09	1.06	0.51	1.23	1.29	0.57
PG 34:3; PG 16:1-18:2;	ME258460	1.15	1.06	0.55	1.17	1.25	0.55
TAG 52:8; TAG 16:3_18:2_18:3;	ME258470	0.98	0.83	1.80	0.48	0.51	1.85
PG 36:7; PG 18:3-18:4;	ME258462	0.87	0.51	1.83	0.73	0.63	1.75
PE 42:4; PE 24:1-18:3;	ME258457	0.79	0.77	1.73	0.76	0.60	1.73
DG(36:3)	ME258377	1.00	0.70	1.62	0.76	0.50	1.62
DG(34:1)	ME258373	0.89	0.73	1.68	0.80	0.59	1.57
PE 42:3; PE 24:1-18:2;	ME258456	0.88	0.66	1.60	0.87	0.55	1.65
DAG 32:3; DAG 16:0-16:3;	ME258363	0.77	1.11	1.18	0.79	1.27	1.25
DAG 34:3; DAG 16:0-18:3;	ME258366	0.69	1.17	1.18	0.81	1.38	1.18
TAG 54:9; TAG 18:3_18:3_18:3;	ME258473	0.81	1.39	1.31	0.55	1.10	1.37
DG(36:5)	ME258379	0.87	1.00	1.30	0.76	1.04	1.34
TG(54:8)	ME258497	0.94	1.19	1.31	0.71	0.89	1.26
DG(36:1)	ME258375	1.14	0.96	1.41	0.66	0.61	1.39
PC (16:0/9:0(CHO))	ME258409	0.81	0.82	1.66	0.92	0.86	1.15
MGDG 38:4; MGDG 20:1-18:3;	ME258406	0.98	0.73	1.57	0.84	0.70	1.32
PC 38:3; PC 20:1-18:2;	ME258441	0.99	0.63	1.54	0.93	0.60	1.39
PC (38:4)	ME258429	1.11	0.62	1.39	0.97	0.60	1.25
PE 38:3; PE 20:1-18:2;	ME258453	0.99	0.62	1.33	1.02	0.62	1.41
DGDG 34:6; DGDG 16:3-18:3;	ME258385	0.89	0.90	1.38	0.90	0.74	1.36
DG(36:4)	ME258378	1.00	0.86	1.34	0.91	0.69	1.27
PE 38:4; PE 18:2-20:2;	ME258454	1.00	0.76	1.29	0.97	0.71	1.30
SQDG 36:6; SQDG 18:3-18:3;	ME258467	0.97	0.98	1.38	0.84	0.81	1.17
DAG 34:4; DAG 16:1-18:3;	ME258367	0.92	0.83	1.35	0.86	0.94	1.28
PG 34:4; PG 16:1-18:3;	ME258461	0.95	0.80	1.36	0.90	0.85	1.25
MGDG 38:6; MGDG 18:3-20:3;	ME258408	1.06	0.70	1.29	0.92	0.92	1.13
PC (36:1)	ME258422	1.02	0.70	1.24	1.11	0.66	1.15
PC (36:3)	ME258424	0.98	0.81	1.19	1.07	0.82	1.09
PC (34:1)	ME258417	1.06	0.87	1.24	0.96	0.77	1.07
PE 34:1; PE 16:0-18:1;	ME258447	1.01	0.94	1.16	1.05	0.78	1.02
PC (31:0)	ME258411	1.13	1.21	0.11	1.56	1.27	0.13
CE(20:3)	ME258360	0.87	1.84	0.06	0.95	2.36	0.08
CE(20:2)	ME258359	0.94	1.64	0.07	1.04	2.22	0.11
CE(18:2)	ME258357	1.02	1.49	0.15	0.93	2.21	0.25
CE(18:3)	ME258358	0.86	1.67	0.19	0.91	2.31	0.26
PC 38:3; PC 20:0-18:3;	ME258440	0.88	1.60	0.26	0.98	2.12	0.28
DAG 38:4; DAG 20:1-18:3;	ME258371	2.19	1.59	0.55	0.39	0.21	0.60
TG(52:2)	ME258486	2.15	1.97	0.33	0.36	0.47	0.30
TG(52:3)	ME258487	2.06	1.97	0.33	0.41	0.50	0.33
TAG 54:5; TAG 18:1_18:2_18:2;	ME258472	1.93	1.84	0.47	0.50	0.49	0.41
TG(52:1)	ME258485	2.13	1.73	0.35	0.42	0.46	0.45
DAG 38:3; DAG 20:1-18:2;	ME258370	2.53	1.78	0.44	0.19	0.05	0.40
TG(53:3)	ME258490	2.48	1.75	0.25	0.33	0.35	0.17
TG(54:4)	ME258494	2.24	2.38	0.20	0.28	0.30	0.19
TG(60:5)	ME258512	2.32	2.21	0.17	0.29	0.24	0.26
TAG 56:4; TAG 18:0_18:3_20:1;	ME258474	2.92	1.78	0.05	0.14	0.16	0.06
TG(56:3)	ME258500	2.83	2.09	0.02	0.11	0.15	0.02
TG(60:3)	ME258510	2.83	1.93	0.03	0.17	0.16	0.03
TG(56:4)	ME258501	2.84	2.01	0.03	0.11	0.17	0.04
TG(58:4)	ME258507	2.84	1.99	0.02	0.14	0.18	0.02
TG(54:2)	ME258492	2.78	1.91	0.08	0.17	0.21	0.07
TAG 56:6; TAG 18:2_18:3_20:1;	ME258475	2.76	2.04	0.08	0.12	0.18	0.08
TG(58:6)	ME258509	2.72	2.00	0.12	0.19	0.13	0.09
TG(58:2)	ME258505	2.61	2.03	0.05	0.32	0.17	0.04
TAG 58:5; TAG 18:2_18:3_22:0;	ME258478	2.73	2.09	0.04	0.21	0.10	0.05
TG(60:4)	ME258511	2.66	2.14	0.03	0.26	0.10	0.04
TG(58:3)	ME258506	2.72	2.21	0.03	0.15	0.14	0.03
TG(56:5)	ME258502	2.68	2.27	0.03	0.13	0.19	0.03
TG(58:5)	ME258508	2.67	2.27	0.02	0.15	0.18	0.04
TAG 58:7; TAG 18:3_18:3_22:1;	ME258479	2.64	2.25	0.09	0.13	0.15	0.09
TG(54:1)	ME258491	2.64	2.18	0.05	0.20	0.16	0.07
TG(56:1)	ME258498	2.53	2.23	0.05	0.22	0.24	0.10
TG(56:2)	ME258499	2.52	2.26	0.03	0.31	0.15	0.03
TAG 56:7; TAG 18:2_18:3_20:2;	ME258476	2.49	2.23	0.23	0.14	0.17	0.21
TG(56:7)	ME258504	2.47	2.18	0.25	0.16	0.18	0.24
TG(54:3)	ME258493	2.58	2.06	0.14	0.20	0.26	0.11
TG(62:4)	ME258514	2.49	2.04	0.21	0.27	0.22	0.14
TG(56:6)	ME258503	1.50	3.73	0.19	0.22	0.37	0.22
AcylGlcADG 50:2; AcylGlcADG 16:0-18:2-16:0;	ME258355	0.94	3.35	0.02	1.31	0.14	0.02
AcylGlcADG 50:3; AcylGlcADG 16:0-18:3-16:0;	ME258356	1.05	3.16	0.02	1.25	0.25	0.02
GlcADG 34:3; GlcADG 16:0-18:3;	ME258393	0.99	2.48	0.42	0.96	0.82	0.37
GlcADG 36:5; GlcADG 18:2-18:3;	ME258394	0.89	2.77	0.31	1.05	0.73	0.30

Factors:

F1	Genotype:Columbai-O_WT \| Treatment:1/2MS-media_3weeks \| Tissue Type:Whole Plant
F2	Genotype:Columbai-O_WT \| Treatment:1/2MS-media_4weeks \| Tissue Type:Whole Plant
F3	Genotype:Columbai-O_WT \| Treatment:SoilGrown_4weeks \| Tissue Type:Leaves
F4	Genotype:SALK_108849C_KO \| Treatment:1/2MS-media_3weeks \| Tissue Type:Whole Plant
F5	Genotype:SALK_108849C_KO \| Treatment:1/2MS-media_4weeks \| Tissue Type:Whole Plant
F6	Genotype:SALK_108849C_KO \| Treatment:SoilGrown_4weeks \| Tissue Type:Leaves

Data matrix