Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST001954)

(Analysis AN003179)

Metabolite	Structure	F1	F2	F3	F4
S-adenosyl-methionine	ME450921	3.23	0.23	0.34	0.20
SAICAR	ME451013	1.06	NA	NA	0.97
CTP	ME451000	1.66	0.83	0.80	0.70
phenylalanine	ME450910	1.79	0.72	0.88	0.61
valine	ME450898	1.48	0.77	1.06	0.69
alanine	ME450892	1.64	0.65	1.06	0.64
dTTP	ME450999	1.59	0.77	1.06	0.57
dATP	ME451002	1.62	0.44	1.13	0.51
riboflavin	ME450925	1.63	0.54	1.18	0.65
carnitine	ME450908	1.59	0.69	1.22	0.49
dCTP	ME450998	1.53	0.54	1.38	0.55
NADPH	ME451008	1.81	0.41	NA	0.52
cystathionine	ME450917	1.94	0.84	0.41	0.80
erythrose-4-phosphate	ME450959	1.95	0.95	0.34	0.76
glucose	ME450952	1.89	0.85	0.71	0.56
phosphoribosylamine	ME450963	1.81	0.85	0.65	0.69
6-phosphogluconic acid	ME450970	1.84	0.92	0.52	0.72
fructose-1-phosphate	ME450968	1.83	0.92	0.51	0.74
cis-aconitate	ME450950	2.02	0.58	0.70	0.70
tryptophan	ME450961	2.25	0.67	0.51	0.56
CDP	ME450992	2.07	0.75	0.47	0.71
choline	ME450893	2.07	0.77	0.60	0.55
glycerophosphocholine	ME450918	2.25	0.43	0.89	0.44
tyrosine	ME450953	2.47	0.41	0.76	0.35
fructose-1;6-bisphosphate	ME450986	2.69	0.67	0.25	0.39
phosphocholine	ME450913	2.58	0.61	0.41	0.40
citrate / isocitrate	ME450958	2.41	0.57	0.46	0.56
NADP+	ME450924	2.51	0.55	0.41	0.53
leucine / isoleucine	ME450902	1.43	0.95	0.79	0.84
sedoheptulose-7-phosphate	ME450976	1.42	1.00	0.79	0.79
5^-methylthioadenosine	ME450920	1.57	0.86	0.61	0.97
acetyl-CoA	ME451010	1.65	0.91	0.50	0.94
GDP	ME450996	1.64	0.95	0.50	0.91
AMP	ME450987	1.31	1.06	0.41	1.22
GMP	ME450989	1.48	0.95	0.44	1.14
UDP	ME450993	1.37	1.09	0.53	1.00
GTP	ME451004	1.36	0.98	0.72	0.94
methioninesulfoxide	ME450909	1.33	1.05	0.67	0.96
threonine	ME450899	1.04	1.16	0.69	1.11
malate	ME450935	1.16	1.12	0.73	1.00
fumarate	ME450931	1.11	1.17	0.71	1.01
phosphoserine	ME450955	1.15	1.18	0.68	0.99
ADP	ME450995	1.26	1.16	0.60	0.98
glycine	ME450891	1.23	1.07	0.69	1.01
NAD+	ME450923	1.26	1.10	0.66	0.98
nicotinamide	ME450900	1.25	0.87	0.79	1.09
CMP	ME450984	1.01	1.00	0.68	1.30
adenosine	ME450919	1.20	1.02	0.60	1.17
dTMP	ME450983	1.14	0.94	0.69	1.22
CDP-choline	ME450922	1.06	1.26	1.21	0.55
creatinine	ME450895	0.90	0.75	1.05	1.30
arginine	ME450911	0.70	1.15	1.10	1.06
orotate	ME450944	0.79	0.84	1.43	0.94
lysine	ME450906	0.73	1.04	1.24	0.99
N-trimethyllysine	ME450914	0.72	1.00	1.30	0.99
betaine	ME450897	0.90	1.00	1.19	0.91
glutamine	ME450938	0.88	0.92	1.32	0.88
S-(2-Succinyl)-L-cysteine	ME450965	1.23	0.83	1.01	0.94
UDP-N-acetylglucosamine	ME451005	1.05	1.00	1.04	0.91
histidine	ME450943	1.13	0.94	1.08	0.85
lactate	ME450928	1.20	0.95	1.02	0.82
phosphoglycerate	ME450956	1.03	0.97	1.24	0.75
trifluoromethanesulfonate*	ME450941	1.12	0.83	1.19	0.86
N-acetylglucosamine-phosphate	ME450979	1.06	1.01	0.90	1.03
xylulose	ME450942	1.09	1.09	0.87	0.95
glycerol-3-phosphate	ME450949	1.15	1.03	0.83	0.99
asparagine	ME450903	1.08	1.07	0.85	1.01
serine	ME450894	1.11	1.04	0.85	1.00
phosphate	ME450929	1.13	1.08	0.92	0.88
rib/ribul/xylul-ose-phosphate	ME450964	1.10	1.17	0.89	0.85
alpha-ketoglutarate	ME450937	0.96	0.97	1.08	0.99
arachidic acid	ME450981	0.91	1.05	1.02	1.02
gamma-amino-butyrate	ME450930	0.93	1.01	1.05	1.00
glutamate	ME450939	0.92	1.02	1.05	1.00
GAR	ME450975	0.97	1.00	0.99	1.04
stearic acid	ME450974	0.97	1.03	0.95	1.05
palmitic acid	ME450967	1.01	1.01	0.96	1.02
saccharopine	ME450971	0.99	1.04	0.96	1.02
methionine	ME450907	0.98	1.10	0.90	1.01
N-acetylglutamate	ME450957	0.96	1.07	0.92	1.06
FAICAR	ME450990	0.85	1.02	1.01	1.12
myristic acid	ME450962	0.83	1.12	0.91	1.13
proline	ME450896	0.79	1.16	0.97	1.08
dihydroxyacetone-phosphate	ME450948	0.91	1.42	0.77	0.89
UTP	ME451001	0.96	1.25	0.85	0.94
ATP	ME451003	0.82	1.29	0.95	0.94
fructose	ME451014	0.92	1.19	1.01	0.89
IMP	ME450988	0.50	1.43	0.95	1.13
lauric acid	ME450960	0.52	1.32	1.00	1.15
CDP-ethanolamine	ME450997	0.69	1.40	0.84	1.07
aspartate	ME450934	0.69	1.23	0.91	1.17
phosphorylethanolamine	ME450936	0.64	1.25	0.83	1.28
phosphatidylethanolamine	ME450978	0.61	1.35	0.72	1.32
pyruvate	ME450927	0.65	1.35	0.77	1.23
S-adenosyl-homocysteine	ME450991	0.80	1.40	0.47	1.33
CoA	ME451009	0.48	1.33	0.55	1.64
UMP	ME450985	0.60	1.24	0.62	1.54
FGAR	ME450982	0.66	1.50	0.18	1.03
argininosuccinate	ME450977	0.37	1.78	0.65	1.20
NADH	ME451007	0.52	1.80	0.28	1.40
creatine	ME450901	0.36	0.45	1.42	1.50
S-(1;2-Dicarboxyethyl)glutathione	ME450994	0.00	1.03	0.82	1.34
succinate	ME450932	0.16	1.40	1.12	1.32
glyceraldehyde-3-phosphate	ME451011	0.41	1.21	1.45	0.92
GSH	ME450980	0.00	1.29	1.46	1.25
GSSG	ME451006	0.00	1.24	1.71	1.04
kynurenine	ME450916	0.32	0.51	2.78	0.39
acetyl-carnitine	ME450915	0.83	0.54	2.24	0.39
gamma-butyrobetaine	ME450905	1.07	0.57	1.92	0.43
carbamoyl-aspartate	ME450951	0.47	0.96	1.72	0.85
phosphoenolpyruvate	ME450947	0.44	0.85	1.95	0.76
quinolinic acid	ME450946	0.37	0.93	1.96	0.74
oleic acid	ME450972	0.55	0.68	2.08	0.70
dihydroorotate	ME450945	0.57	0.90	1.86	0.56
guanosine	ME450973	0.69	0.85	1.78	0.67
citrulline	ME450912	0.59	0.76	1.90	0.74
ornithine	ME450904	0.75	0.69	1.89	0.67
picolinic acid	ME450933	1.27	0.74	1.38	0.61
caffeine	ME450926	0.91	0.69	1.61	0.84
sorbitol	ME450954	0.86	0.80	1.60	0.74
hydroxyglutarate	ME450940	1.13	0.62	1.65	0.60
cytidine	ME450966	0.92	0.66	1.78	0.64
inosine	ME450969	0.94	0.73	1.73	0.59

Factors:

F1	Strain:dGsh1
F2	Strain:H3A110C
F3	Strain:H3H113N
F4	Strain:wild type

Data matrix