Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for (Study ST001676)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Donors:D1 \| Cell Type:Th0_(Th17) \| Treatment:Activated
F2	Donors:D1 \| Cell Type:Th0_(Th1/Th2) \| Treatment:Activated
F3	Donors:D1 \| Cell Type:Th0_(Treg) \| Treatment:Activated
F4	Donors:D1 \| Cell Type:Th17 \| Treatment:Differentiated
F5	Donors:D1 \| Cell Type:Th1 \| Treatment:Differentiated
F6	Donors:D1 \| Cell Type:Th2 \| Treatment:Differentiated
F7	Donors:D1 \| Cell Type:Thp_CD25 \| Treatment:T-naive
F8	Donors:D1 \| Cell Type:Thp \| Treatment:T-naive
F9	Donors:D1 \| Cell Type:Treg \| Treatment:Differentiated
F10	Donors:D2 \| Cell Type:Th0_(Th17) \| Treatment:Activated
F11	Donors:D2 \| Cell Type:Th0_(Th1/Th2) \| Treatment:Activated
F12	Donors:D2 \| Cell Type:Th0_(Treg) \| Treatment:Activated
F13	Donors:D2 \| Cell Type:Th17 \| Treatment:Differentiated
F14	Donors:D2 \| Cell Type:Th1 \| Treatment:Differentiated
F15	Donors:D2 \| Cell Type:Th2 \| Treatment:Differentiated
F16	Donors:D2 \| Cell Type:Thp_CD25 \| Treatment:T-naive
F17	Donors:D2 \| Cell Type:Thp \| Treatment:T-naive
F18	Donors:D2 \| Cell Type:Treg \| Treatment:Differentiated
F19	Donors:D3 \| Cell Type:Th0_(Th17) \| Treatment:Activated
F20	Donors:D3 \| Cell Type:Th0_(Th1/Th2) \| Treatment:Activated
F21	Donors:D3 \| Cell Type:Th0_(Treg) \| Treatment:Activated
F22	Donors:D3 \| Cell Type:Th17 \| Treatment:Differentiated
F23	Donors:D3 \| Cell Type:Th1 \| Treatment:Differentiated
F24	Donors:D3 \| Cell Type:Th2 \| Treatment:Differentiated
F25	Donors:D3 \| Cell Type:Thp \| Treatment:T-naive
F26	Donors:D3 \| Cell Type:Treg \| Treatment:Differentiated
F27	Donors:D4 \| Cell Type:Th0_(Th17) \| Treatment:Activated
F28	Donors:D4 \| Cell Type:Th0_(Th1/Th2) \| Treatment:Activated
F29	Donors:D4 \| Cell Type:Th0_(Treg) \| Treatment:Activated
F30	Donors:D4 \| Cell Type:Th17 \| Treatment:Differentiated
F31	Donors:D4 \| Cell Type:Th1 \| Treatment:Differentiated
F32	Donors:D4 \| Cell Type:Th2 \| Treatment:Differentiated
F33	Donors:D4 \| Cell Type:Thp_CD25 \| Treatment:T-naive
F34	Donors:D4 \| Cell Type:Thp \| Treatment:T-naive
F35	Donors:D4 \| Cell Type:Treg \| Treatment:Differentiated
F36	Donors:D5 \| Cell Type:Th0_(Th17) \| Treatment:Activated
F37	Donors:D5 \| Cell Type:Th0_(Th1/Th2) \| Treatment:Activated
F38	Donors:D5 \| Cell Type:Th0_(Treg) \| Treatment:Activated
F39	Donors:D5 \| Cell Type:Th17 \| Treatment:Differentiated
F40	Donors:D5 \| Cell Type:Th1 \| Treatment:Differentiated
F41	Donors:D5 \| Cell Type:Th2 \| Treatment:Differentiated
F42	Donors:D5 \| Cell Type:Thp_CD25 \| Treatment:T-naive
F43	Donors:D5 \| Cell Type:Thp \| Treatment:T-naive
F44	Donors:D5 \| Cell Type:Treg \| Treatment:Differentiated
F45	Donors:mass / charge \| Cell Type:- \| Treatment:-
F46	Donors:retention time \| Cell Type:- \| Treatment:-

Data matrix