Clustering data with heatmap algorithm for (Study ST001901)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Genotype:gem1 knockout | Media:SD+Leucine | Treatment:ConcA
F2Genotype:gem1 knockout | Media:SD+Leucine | Treatment:DMSO
F3Genotype:gem1 knockout | Media:YPAD | Treatment:ConcA
F4Genotype:gem1 knockout | Media:YPAD | Treatment:DMSO
F5Genotype:gem1 knockout | Media:YPAD | Treatment:Rap
F6Genotype:gem1 vps27 double knockout | Media:SD+Leucine | Treatment:ConcA
F7Genotype:gem1 vps27 double knockout | Media:SD+Leucine | Treatment:DMSO
F8Genotype:Pooled QC sample | Media:N/A | Treatment:N/A
F9Genotype:Process blank | Media:N/A | Treatment:N/A
F10Genotype:vps27 knockout | Media:SD+Leucine | Treatment:ConcA
F11Genotype:vps27 knockout | Media:SD+Leucine | Treatment:DMSO
F12Genotype:wild-type | Media:MinD | Treatment:DMSO
F13Genotype:wild-type | Media:SD+Leucine | Treatment:ConcA
F14Genotype:wild-type | Media:SD+Leucine | Treatment:DMSO
F15Genotype:wild-type | Media:SD | Treatment:DMSO
F16Genotype:wild-type | Media:YPAD | Treatment:ConcA
F17Genotype:wild-type | Media:YPAD | Treatment:DMSO
F18Genotype:wild-type | Media:YPAD | Treatment:Rap
Data matrix
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