Clustering data with heatmap algorithm for (Study ST002139)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Tissue factor:Bacteria Extract | Treatment factor:No Treatment
F2Tissue factor:Gastrolobium Bottom Leaf | Treatment factor:No Treatment
F3Tissue factor:Gastrolobium Leaf | Treatment factor:107.1 ng/ml Fluoroacetate spiked
F4Tissue factor:Gastrolobium Leaf | Treatment factor:10.7 ng/ml Fluoroacetate spiked
F5Tissue factor:Gastrolobium Leaf | Treatment factor:357.1 ng/ml Fluoroacetate spiked
F6Tissue factor:Gastrolobium Leaf | Treatment factor:35.7 ng/ml Fluoroacetate spiked
F7Tissue factor:Gastrolobium Leaf | Treatment factor:C13 Acetate
F8Tissue factor:Gastrolobium Leaf | Treatment factor:C13 Adenosine
F9Tissue factor:Gastrolobium Leaf | Treatment factor:C13 Serine
F10Tissue factor:Gastrolobium Leaf | Treatment factor:FE 100uM NaF
F11Tissue factor:Gastrolobium Leaf | Treatment factor:No Treatment
F12Tissue factor:Gastrolobium Root | Treatment factor:No Treatment
F13Tissue factor:Gastrolobium Stem | Treatment factor:No Treatment
F14Tissue factor:Gastrolobium Top Leaf | Treatment factor:No Treatment
F15Tissue factor:Method Blank | Treatment factor:No Treatment
F16Tissue factor:Pooled Sample | Treatment factor:No Treatment
F17Tissue factor:Standard Curve | Treatment factor:0 ng/ml Standards
F18Tissue factor:Standard Curve | Treatment factor:100 ng/ml Standards
F19Tissue factor:Standard Curve | Treatment factor:250 ng/ml Standards
F20Tissue factor:Standard Curve | Treatment factor:25 ng/ml Standards
F21Tissue factor:Standard Curve | Treatment factor:5 ng/ml Standards
Data matrix
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