Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for (Study ST002308)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Bacterial strain:Bacillus megaterium \| Concentration:5 times concentrated
F2	Bacterial strain:Bacillus megaterium \| Concentration:5 times diluted
F3	Bacterial strain:Bacillus subtilis \| Concentration:5 times concentrated
F4	Bacterial strain:Bacillus subtilis \| Concentration:5 times diluted
F5	Bacterial strain:Dermabacter sp. \| Concentration:5 times concentrated
F6	Bacterial strain:Dermabacter sp. \| Concentration:5 times diluted
F7	Bacterial strain:Enterococcus faecium 320 \| Concentration:5 times concentrated
F8	Bacterial strain:Enterococcus faecium 320 \| Concentration:5 times diluted
F9	Bacterial strain:Enterococcus faecium 321 \| Concentration:5 times concentrated
F10	Bacterial strain:Enterococcus faecium 321 \| Concentration:5 times diluted
F11	Bacterial strain:Enterococcus faecium 322 \| Concentration:5 times concentrated
F12	Bacterial strain:Enterococcus faecium 322 \| Concentration:5 times diluted
F13	Bacterial strain:Enterococcus faecium 323 \| Concentration:5 times concentrated
F14	Bacterial strain:Enterococcus faecium 323 \| Concentration:5 times diluted
F15	Bacterial strain:Enterococcus faecium 324 \| Concentration:5 times concentrated
F16	Bacterial strain:Enterococcus faecium 324 \| Concentration:5 times diluted
F17	Bacterial strain:Enterococcus faecium 325 \| Concentration:5 times concentrated
F18	Bacterial strain:Enterococcus faecium 325 \| Concentration:5 times diluted
F19	Bacterial strain:Enterococcus faecium 326 \| Concentration:5 times concentrated
F20	Bacterial strain:Enterococcus faecium 326 \| Concentration:5 times diluted
F21	Bacterial strain:Enterococcus faecium 327 \| Concentration:5 times concentrated
F22	Bacterial strain:Enterococcus faecium 327 \| Concentration:5 times diluted
F23	Bacterial strain:Enterococcus faecium 328 \| Concentration:5 times concentrated
F24	Bacterial strain:Enterococcus faecium 328 \| Concentration:5 times diluted
F25	Bacterial strain:Enterococcus faecium 348 \| Concentration:5 times concentrated
F26	Bacterial strain:Enterococcus faecium 348 \| Concentration:5 times diluted
F27	Bacterial strain:Staphylococcus epidermidis 1-1 \| Concentration:5 times concentrated
F28	Bacterial strain:Staphylococcus epidermidis 1-1 \| Concentration:5 times diluted
F29	Bacterial strain:Staphylococcus epidermidis 1-2 \| Concentration:5 times concentrated
F30	Bacterial strain:Staphylococcus epidermidis 1-2 \| Concentration:5 times diluted
F31	Bacterial strain:Staphylococcus epidermidis 2-1 \| Concentration:5 times concentrated
F32	Bacterial strain:Staphylococcus epidermidis 2-1 \| Concentration:5 times diluted
F33	Bacterial strain:Staphylococcus epidermidis 2-5 \| Concentration:5 times concentrated
F34	Bacterial strain:Staphylococcus epidermidis 2-5 \| Concentration:5 times diluted
F35	Bacterial strain:Staphylococcus epidermidis 2-6 \| Concentration:5 times concentrated
F36	Bacterial strain:Staphylococcus epidermidis 2-6 \| Concentration:5 times diluted
F37	Bacterial strain:Staphylococcus epidermidis \| Concentration:5 times concentrated
F38	Bacterial strain:Staphylococcus epidermidis \| Concentration:5 times diluted
F39	Bacterial strain:Staphylococcus epidermidis Tu \| Concentration:5 times concentrated
F40	Bacterial strain:Staphylococcus epidermidis Tu \| Concentration:5 times diluted
F41	Bacterial strain:TSB control \| Concentration:5 times concentrated
F42	Bacterial strain:TSB control \| Concentration:5 times diluted

Data matrix