Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for (Study ST002958)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Tissue:Brain \| Genotype:N/A \| Timepoint:N/A \| Treatment:N/A
F2	Tissue:Brain \| Genotype:- \| Timepoint:Week 12 \| Treatment:Control
F3	Tissue:Brain \| Genotype:+ \| Timepoint:Week 12 \| Treatment:Control
F4	Tissue:Brain \| Genotype:- \| Timepoint:Week 12 \| Treatment:SobAM2
F5	Tissue:Brain \| Genotype:+ \| Timepoint:Week 12 \| Treatment:SobAM2
F6	Tissue:Brain \| Genotype:- \| Timepoint:Week 18 \| Treatment:Control
F7	Tissue:Brain \| Genotype:+ \| Timepoint:Week 18 \| Treatment:Control
F8	Tissue:Brain \| Genotype:- \| Timepoint:Week 18 \| Treatment:SobAM2
F9	Tissue:Brain \| Genotype:+ \| Timepoint:Week 18 \| Treatment:SobAM2
F10	Tissue:Brain \| Genotype:- \| Timepoint:Week 24 \| Treatment:Control
F11	Tissue:Brain \| Genotype:+ \| Timepoint:Week 24 \| Treatment:Control
F12	Tissue:Brain \| Genotype:- \| Timepoint:Week 6 \| Treatment:Control
F13	Tissue:Brain \| Genotype:+ \| Timepoint:Week 6 \| Treatment:Control
F14	Tissue:N/A \| Genotype:N/A \| Timepoint:N/A \| Treatment:N/A
F15	Tissue:Serum \| Genotype:N/A \| Timepoint:N/A \| Treatment:N/A
F16	Tissue:Serum \| Genotype:- \| Timepoint:Week 12 \| Treatment:Control
F17	Tissue:Serum \| Genotype:+ \| Timepoint:Week 12 \| Treatment:Control
F18	Tissue:Serum \| Genotype:- \| Timepoint:Week 12 \| Treatment:SobAM2
F19	Tissue:Serum \| Genotype:+ \| Timepoint:Week 12 \| Treatment:SobAM2
F20	Tissue:Serum \| Genotype:- \| Timepoint:Week 18 \| Treatment:Control
F21	Tissue:Serum \| Genotype:+ \| Timepoint:Week 18 \| Treatment:Control
F22	Tissue:Serum \| Genotype:- \| Timepoint:Week 18 \| Treatment:SobAM2
F23	Tissue:Serum \| Genotype:+ \| Timepoint:Week 18 \| Treatment:SobAM2
F24	Tissue:Serum \| Genotype:- \| Timepoint:Week 6 \| Treatment:Control
F25	Tissue:Serum \| Genotype:+ \| Timepoint:Week 6 \| Treatment:Control
F26	Tissue:Spinal cord \| Genotype:N/A \| Timepoint:N/A \| Treatment:N/A
F27	Tissue:Spinal cord \| Genotype:- \| Timepoint:Week 12 \| Treatment:Control
F28	Tissue:Spinal cord \| Genotype:+ \| Timepoint:Week 12 \| Treatment:Control
F29	Tissue:Spinal cord \| Genotype:- \| Timepoint:Week 12 \| Treatment:SobAM2
F30	Tissue:Spinal cord \| Genotype:+ \| Timepoint:Week 12 \| Treatment:SobAM2
F31	Tissue:Spinal cord \| Genotype:- \| Timepoint:Week 18 \| Treatment:Control
F32	Tissue:Spinal cord \| Genotype:+ \| Timepoint:Week 18 \| Treatment:Control
F33	Tissue:Spinal cord \| Genotype:- \| Timepoint:Week 18 \| Treatment:SobAM2
F34	Tissue:Spinal cord \| Genotype:+ \| Timepoint:Week 18 \| Treatment:SobAM2
F35	Tissue:Spinal cord \| Genotype:- \| Timepoint:Week 24 \| Treatment:Control
F36	Tissue:Spinal cord \| Genotype:+ \| Timepoint:Week 24 \| Treatment:Control
F37	Tissue:Spinal cord \| Genotype:- \| Timepoint:Week 6 \| Treatment:Control
F38	Tissue:Spinal cord \| Genotype:+ \| Timepoint:Week 6 \| Treatment:Control

Data matrix