Clustering data with heatmap algorithm for (Study ST003188)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Sample source:Bladder | Age (months):18 | Sex:Female | Organ:Bladder
F2Sample source:Bladder | Age (months):18 | Sex:Male | Organ:Bladder
F3Sample source:Bladder | Age (months):1 | Sex:Female | Organ:Bladder
F4Sample source:Bladder | Age (months):1 | Sex:Male | Organ:Bladder
F5Sample source:Bladder | Age (months):21 | Sex:Female | Organ:Bladder
F6Sample source:Bladder | Age (months):21 | Sex:Male | Organ:Bladder
F7Sample source:Bladder | Age (months):24 | Sex:Female | Organ:Bladder
F8Sample source:Bladder | Age (months):24 | Sex:Male | Organ:Bladder
F9Sample source:Bladder | Age (months):3 | Sex:Female | Organ:Bladder
F10Sample source:Bladder | Age (months):3 | Sex:Male | Organ:Bladder
F11Sample source:Blank | Age (months):NA | Sex:NA | Organ:NA
F12Sample source:Brain | Age (months):18 | Sex:Female | Organ:Brain
F13Sample source:Brain | Age (months):18 | Sex:Male | Organ:Brain
F14Sample source:Brain | Age (months):1 | Sex:Female | Organ:Brain
F15Sample source:Brain | Age (months):1 | Sex:Male | Organ:Brain
F16Sample source:Brain | Age (months):21 | Sex:Female | Organ:Brain
F17Sample source:Brain | Age (months):21 | Sex:Male | Organ:Brain
F18Sample source:Brain | Age (months):24 | Sex:Female | Organ:Brain
F19Sample source:Brain | Age (months):24 | Sex:Male | Organ:Brain
F20Sample source:Brain | Age (months):3 | Sex:Female | Organ:Brain
F21Sample source:Brain | Age (months):3 | Sex:Male | Organ:Brain
F22Sample source:Heart | Age (months):18 | Sex:Female | Organ:Heart
F23Sample source:Heart | Age (months):18 | Sex:Male | Organ:Heart
F24Sample source:Heart | Age (months):1 | Sex:Female | Organ:Heart
F25Sample source:Heart | Age (months):1 | Sex:Male | Organ:Heart
F26Sample source:Heart | Age (months):21 | Sex:Female | Organ:Heart
F27Sample source:Heart | Age (months):21 | Sex:Male | Organ:Heart
F28Sample source:Heart | Age (months):24 | Sex:Female | Organ:Heart
F29Sample source:Heart | Age (months):24 | Sex:Male | Organ:Heart
F30Sample source:Heart | Age (months):3 | Sex:Female | Organ:Heart
F31Sample source:Heart | Age (months):3 | Sex:Male | Organ:Heart
F32Sample source:Kidney | Age (months):18 | Sex:Female | Organ:Kidney
F33Sample source:Kidney | Age (months):18 | Sex:Male | Organ:Kidney
F34Sample source:Kidney | Age (months):1 | Sex:Female | Organ:Kidney
F35Sample source:Kidney | Age (months):1 | Sex:Male | Organ:Kidney
F36Sample source:Kidney | Age (months):21 | Sex:Female | Organ:Kidney
F37Sample source:Kidney | Age (months):21 | Sex:Male | Organ:Kidney
F38Sample source:Kidney | Age (months):24 | Sex:Female | Organ:Kidney
F39Sample source:Kidney | Age (months):24 | Sex:Male | Organ:Kidney
F40Sample source:Kidney | Age (months):3 | Sex:Female | Organ:Kidney
F41Sample source:Kidney | Age (months):3 | Sex:Male | Organ:Kidney
F42Sample source:Liver | Age (months):18 | Sex:Female | Organ:Liver
F43Sample source:Liver | Age (months):18 | Sex:Male | Organ:Liver
F44Sample source:Liver | Age (months):1 | Sex:Female | Organ:Liver
F45Sample source:Liver | Age (months):1 | Sex:Male | Organ:Liver
F46Sample source:Liver | Age (months):21 | Sex:Female | Organ:Liver
F47Sample source:Liver | Age (months):21 | Sex:Male | Organ:Liver
F48Sample source:Liver | Age (months):24 | Sex:Female | Organ:Liver
F49Sample source:Liver | Age (months):24 | Sex:Male | Organ:Liver
F50Sample source:Liver | Age (months):3 | Sex:Female | Organ:Liver
F51Sample source:Liver | Age (months):3 | Sex:Male | Organ:Liver
F52Sample source:Lung | Age (months):18 | Sex:Female | Organ:Lung
F53Sample source:Lung | Age (months):18 | Sex:Male | Organ:Lung
F54Sample source:Lung | Age (months):1 | Sex:Female | Organ:Lung
F55Sample source:Lung | Age (months):1 | Sex:Male | Organ:Lung
F56Sample source:Lung | Age (months):21 | Sex:Female | Organ:Lung
F57Sample source:Lung | Age (months):21 | Sex:Male | Organ:Lung
F58Sample source:Lung | Age (months):24 | Sex:Female | Organ:Lung
F59Sample source:Lung | Age (months):24 | Sex:Male | Organ:Lung
F60Sample source:Lung | Age (months):3 | Sex:Female | Organ:Lung
F61Sample source:Lung | Age (months):3 | Sex:Male | Organ:Lung
F62Sample source:Muscle (Quad) | Age (months):18 | Sex:Female | Organ:Muscle (Quad)
F63Sample source:Muscle (Quad) | Age (months):18 | Sex:Male | Organ:Muscle (Quad)
F64Sample source:Muscle (Quad) | Age (months):1 | Sex:Female | Organ:Muscle (Quad)
F65Sample source:Muscle (Quad) | Age (months):1 | Sex:Male | Organ:Muscle (Quad)
F66Sample source:Muscle (Quad) | Age (months):21 | Sex:Female | Organ:Muscle (Quad)
F67Sample source:Muscle (Quad) | Age (months):21 | Sex:Male | Organ:Muscle (Quad)
F68Sample source:Muscle (Quad) | Age (months):24 | Sex:Female | Organ:Muscle (Quad)
F69Sample source:Muscle (Quad) | Age (months):24 | Sex:Male | Organ:Muscle (Quad)
F70Sample source:Muscle (Quad) | Age (months):3 | Sex:Female | Organ:Muscle (Quad)
F71Sample source:Muscle (Quad) | Age (months):3 | Sex:Male | Organ:Muscle (Quad)
F72Sample source:Pancreas | Age (months):18 | Sex:Female | Organ:Pancreas
F73Sample source:Pancreas | Age (months):18 | Sex:Male | Organ:Pancreas
F74Sample source:Pancreas | Age (months):1 | Sex:Female | Organ:Pancreas
F75Sample source:Pancreas | Age (months):1 | Sex:Male | Organ:Pancreas
F76Sample source:Pancreas | Age (months):21 | Sex:Female | Organ:Pancreas
F77Sample source:Pancreas | Age (months):21 | Sex:Male | Organ:Pancreas
F78Sample source:Pancreas | Age (months):24 | Sex:Female | Organ:Pancreas
F79Sample source:Pancreas | Age (months):24 | Sex:Male | Organ:Pancreas
F80Sample source:Pancreas | Age (months):3 | Sex:Female | Organ:Pancreas
F81Sample source:Pancreas | Age (months):3 | Sex:Male | Organ:Pancreas
F82Sample source:Plasma | Age (months):18 | Sex:Female | Organ:Plasma
F83Sample source:Plasma | Age (months):18 | Sex:Male | Organ:Plasma
F84Sample source:Plasma | Age (months):1 | Sex:Female | Organ:Plasma
F85Sample source:Plasma | Age (months):1 | Sex:Male | Organ:Plasma
F86Sample source:Plasma | Age (months):21 | Sex:Female | Organ:Plasma
F87Sample source:Plasma | Age (months):21 | Sex:Male | Organ:Plasma
F88Sample source:Plasma | Age (months):24 | Sex:Female | Organ:Plasma
F89Sample source:Plasma | Age (months):24 | Sex:Male | Organ:Plasma
F90Sample source:Plasma | Age (months):3 | Sex:Female | Organ:Plasma
F91Sample source:Plasma | Age (months):3 | Sex:Male | Organ:Plasma
F92Sample source:Pool | Age (months):NA | Sex:NA | Organ:Bladder
F93Sample source:Pool | Age (months):NA | Sex:NA | Organ:Brain
F94Sample source:Pool | Age (months):NA | Sex:NA | Organ:Heart
F95Sample source:Pool | Age (months):NA | Sex:NA | Organ:Kidney
F96Sample source:Pool | Age (months):NA | Sex:NA | Organ:Liver
F97Sample source:Pool | Age (months):NA | Sex:NA | Organ:Lung
F98Sample source:Pool | Age (months):NA | Sex:NA | Organ:Muscle (Quad)
F99Sample source:Pool | Age (months):NA | Sex:NA | Organ:Pancreas
F100Sample source:Pool | Age (months):NA | Sex:NA | Organ:Plasma
F101Sample source:Pool | Age (months):NA | Sex:NA | Organ:Spleen
F102Sample source:Pool | Age (months):NA | Sex:NA | Organ:Thymus
F103Sample source:Pool | Age (months):NA | Sex:NA | Organ:Tongue
F104Sample source:Spleen | Age (months):18 | Sex:Female | Organ:Spleen
F105Sample source:Spleen | Age (months):18 | Sex:Male | Organ:Spleen
F106Sample source:Spleen | Age (months):1 | Sex:Female | Organ:Spleen
F107Sample source:Spleen | Age (months):1 | Sex:Male | Organ:Spleen
F108Sample source:Spleen | Age (months):21 | Sex:Female | Organ:Spleen
F109Sample source:Spleen | Age (months):21 | Sex:Male | Organ:Spleen
F110Sample source:Spleen | Age (months):24 | Sex:Female | Organ:Spleen
F111Sample source:Spleen | Age (months):24 | Sex:Male | Organ:Spleen
F112Sample source:Spleen | Age (months):3 | Sex:Female | Organ:Spleen
F113Sample source:Spleen | Age (months):3 | Sex:Male | Organ:Spleen
F114Sample source:Thymus | Age (months):18 | Sex:Female | Organ:Thymus
F115Sample source:Thymus | Age (months):18 | Sex:Male | Organ:Thymus
F116Sample source:Thymus | Age (months):1 | Sex:Female | Organ:Thymus
F117Sample source:Thymus | Age (months):1 | Sex:Male | Organ:Thymus
F118Sample source:Thymus | Age (months):21 | Sex:Female | Organ:Thymus
F119Sample source:Thymus | Age (months):21 | Sex:Male | Organ:Thymus
F120Sample source:Thymus | Age (months):24 | Sex:Female | Organ:Thymus
F121Sample source:Thymus | Age (months):24 | Sex:Male | Organ:Thymus
F122Sample source:Thymus | Age (months):3 | Sex:Female | Organ:Thymus
F123Sample source:Thymus | Age (months):3 | Sex:Male | Organ:Thymus
F124Sample source:Tongue | Age (months):18 | Sex:Female | Organ:Tongue
F125Sample source:Tongue | Age (months):18 | Sex:Male | Organ:Tongue
F126Sample source:Tongue | Age (months):1 | Sex:Female | Organ:Tongue
F127Sample source:Tongue | Age (months):1 | Sex:Male | Organ:Tongue
F128Sample source:Tongue | Age (months):21 | Sex:Female | Organ:Tongue
F129Sample source:Tongue | Age (months):21 | Sex:Male | Organ:Tongue
F130Sample source:Tongue | Age (months):24 | Sex:Female | Organ:Tongue
F131Sample source:Tongue | Age (months):24 | Sex:Male | Organ:Tongue
F132Sample source:Tongue | Age (months):3 | Sex:Female | Organ:Tongue
F133Sample source:Tongue | Age (months):3 | Sex:Male | Organ:Tongue
Data matrix
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