Clustering data with heatmap algorithm for (Study ST003418)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Genotype:Process blank | Sample source:Process blank | Clonality:Process blank | Replicate:Process blank
F2Genotype:TLCD1 KO | Sample source:HeLa | Clonality:Cell pool | Replicate:1
F3Genotype:TLCD1 KO | Sample source:HeLa | Clonality:Cell pool | Replicate:2
F4Genotype:TLCD1 KO | Sample source:HeLa | Clonality:Cell pool | Replicate:3
F5Genotype:TLCD1 KO | Sample source:HeLa | Clonality:Clone derived | Replicate:1
F6Genotype:TLCD1 KO | Sample source:HeLa | Clonality:Clone derived | Replicate:2
F7Genotype:TLCD1 KO | Sample source:HeLa | Clonality:Clone derived | Replicate:3
F8Genotype:TLCD1 KO | Sample source:U2OS | Clonality:Cell pool | Replicate:1
F9Genotype:TLCD1 KO | Sample source:U2OS | Clonality:Cell pool | Replicate:2
F10Genotype:TLCD1 KO | Sample source:U2OS | Clonality:Cell pool | Replicate:3
F11Genotype:TLCD1 KO | Sample source:U2OS | Clonality:Clone derived | Replicate:1
F12Genotype:TLCD1 KO | Sample source:U2OS | Clonality:Clone derived | Replicate:2
F13Genotype:TLCD1 KO | Sample source:U2OS | Clonality:Clone derived | Replicate:3
F14Genotype:Wild-type | Sample source:HeLa | Clonality:Cell pool | Replicate:1
F15Genotype:Wild-type | Sample source:HeLa | Clonality:Cell pool | Replicate:2
F16Genotype:Wild-type | Sample source:HeLa | Clonality:Cell pool | Replicate:3
F17Genotype:Wild-type | Sample source:HeLa | Clonality:Clone derived | Replicate:1
F18Genotype:Wild-type | Sample source:HeLa | Clonality:Clone derived | Replicate:2
F19Genotype:Wild-type | Sample source:HeLa | Clonality:Clone derived | Replicate:3
F20Genotype:Wild-type | Sample source:U2OS | Clonality:Cell pool | Replicate:1
F21Genotype:Wild-type | Sample source:U2OS | Clonality:Cell pool | Replicate:2
F22Genotype:Wild-type | Sample source:U2OS | Clonality:Cell pool | Replicate:3
F23Genotype:Wild-type | Sample source:U2OS | Clonality:Clone derived | Replicate:1
F24Genotype:Wild-type | Sample source:U2OS | Clonality:Clone derived | Replicate:2
F25Genotype:Wild-type | Sample source:U2OS | Clonality:Clone derived | Replicate:3
Data matrix
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