Clustering data with heatmap algorithm for (Study ST003962)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Sample source:143B_A_A_001 | Treatment:143B_A_A
F2	Sample source:143B_A_A_002 | Treatment:143B_A_A
F3	Sample source:143B_A_A_003 | Treatment:143B_A_A
F4	Sample source:143B_WT_001 | Treatment:143B_WT
F5	Sample source:143B_WT_002 | Treatment:143B_WT
F6	Sample source:143B_WT_003 | Treatment:143B_WT
F7	Sample source:HAP_A-A_001 | Treatment:HAP_A-A
F8	Sample source:HAP_A-A_002 | Treatment:HAP_A-A
F9	Sample source:HAP_A-A_003 | Treatment:HAP_A-A
F10	Sample source:HAP_WT_001 | Treatment:HAP_WT
F11	Sample source:HAP_WT_002 | Treatment:HAP_WT
F12	Sample source:HAP_WT_003 | Treatment:HAP_WT
F13	Sample source:HEK_A-A_001 | Treatment:HEK_A-A
F14	Sample source:HEK_A-A_002 | Treatment:HEK_A-A
F15	Sample source:HEK_A-A_003 | Treatment:HEK_A-A
F16	Sample source:HEKSDHAF2KO_001 | Treatment:HEKSDHAF2KO
F17	Sample source:HEKSDHAF2KO_002 | Treatment:HEKSDHAF2KO
F18	Sample source:HEKSDHAF2KO_003 | Treatment:HEKSDHAF2KO
F19	Sample source:HEKSDHAF2KO_A-A_001 | Treatment:HEKSDHAF2KO_A-A
F20	Sample source:HEKSDHAF2KO_A-A_002 | Treatment:HEKSDHAF2KO_A-A
F21	Sample source:HEKSDHAF2KO_A-A_003 | Treatment:HEKSDHAF2KO_A-A
F22	Sample source:HEKSDHAF2KO_CIIIKO_A-A_001 | Treatment:HEKSDHAF2KO_CIIIKO_A-A
F23	Sample source:HEKSDHAF2KO_CIIIKO_A-A_002 | Treatment:HEKSDHAF2KO_CIIIKO_A-A
F24	Sample source:HEKSDHAF2KO_CIIIKO_A-A_003 | Treatment:HEKSDHAF2KO_CIIIKO_A-A
F25	Sample source:HEKSDHAF2_SDHAF2FLAG_001 | Treatment:HEKSDHAF2_SDHAF2FLAG
F26	Sample source:HEKSDHAF2_SDHAF2FLAG_002 | Treatment:HEKSDHAF2_SDHAF2FLAG
F27	Sample source:HEKSDHAF2_SDHAF2FLAG_003 | Treatment:HEKSDHAF2_SDHAF2FLAG
F28	Sample source:HEK_WT_001 | Treatment:HEK_WT
F29	Sample source:HEK_WT_002 | Treatment:HEK_WT
F30	Sample source:HEK_WT_003 | Treatment:HEK_WT
F31	Sample source:HeLa_A-A_001 | Treatment:HeLa_A-A
F32	Sample source:HeLa_A-A_002 | Treatment:HeLa_A-A
F33	Sample source:HeLa_A-A_003 | Treatment:HeLa_A-A
F34	Sample source:HeLa_WT_001 | Treatment:HeLa_WT
F35	Sample source:HeLa_WT_002 | Treatment:HeLa_WT
F36	Sample source:HeLa_WT_003 | Treatment:HeLa_WT
F37	Sample source:MCF7_A-A_001 | Treatment:MCF7_A-A
F38	Sample source:MCF7_A-A_002 | Treatment:MCF7_A-A
F39	Sample source:MCF7_A-A_003 | Treatment:MCF7_A-A
F40	Sample source:MCF7_WT_001 | Treatment:MCF7_WT
F41	Sample source:MCF7_WT_002 | Treatment:MCF7_WT
F42	Sample source:MCF7_WT_003 | Treatment:MCF7_WT

Data matrix