Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for (Study ST004110)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Sample source:blank \| SEC Fraction:blank \| Genotype:NA
F2	Sample source:Plasma VLDL Fraction \| SEC Fraction:10 \| Genotype:PNPLA3(I148M)
F3	Sample source:Plasma VLDL Fraction \| SEC Fraction:10 \| Genotype:PNPLA3 WT
F4	Sample source:Plasma VLDL Fraction \| SEC Fraction:11 \| Genotype:PNPLA3(I148M)
F5	Sample source:Plasma VLDL Fraction \| SEC Fraction:11 \| Genotype:PNPLA3 WT
F6	Sample source:Plasma VLDL Fraction \| SEC Fraction:12 \| Genotype:PNPLA3(I148M)
F7	Sample source:Plasma VLDL Fraction \| SEC Fraction:12 \| Genotype:PNPLA3 WT
F8	Sample source:Plasma VLDL Fraction \| SEC Fraction:13 \| Genotype:PNPLA3(I148M)
F9	Sample source:Plasma VLDL Fraction \| SEC Fraction:13 \| Genotype:PNPLA3 WT
F10	Sample source:Plasma VLDL Fraction \| SEC Fraction:14 \| Genotype:PNPLA3(I148M)
F11	Sample source:Plasma VLDL Fraction \| SEC Fraction:14 \| Genotype:PNPLA3 WT
F12	Sample source:Plasma VLDL Fraction \| SEC Fraction:15 \| Genotype:PNPLA3(I148M)
F13	Sample source:Plasma VLDL Fraction \| SEC Fraction:15 \| Genotype:PNPLA3 WT
F14	Sample source:Plasma VLDL Fraction \| SEC Fraction:16 \| Genotype:PNPLA3(I148M)
F15	Sample source:Plasma VLDL Fraction \| SEC Fraction:16 \| Genotype:PNPLA3 WT
F16	Sample source:Plasma VLDL Fraction \| SEC Fraction:17 \| Genotype:PNPLA3(I148M)
F17	Sample source:Plasma VLDL Fraction \| SEC Fraction:17 \| Genotype:PNPLA3 WT
F18	Sample source:Plasma VLDL Fraction \| SEC Fraction:18 \| Genotype:PNPLA3(I148M)
F19	Sample source:Plasma VLDL Fraction \| SEC Fraction:18 \| Genotype:PNPLA3 WT
F20	Sample source:Plasma VLDL Fraction \| SEC Fraction:19 \| Genotype:PNPLA3(I148M)
F21	Sample source:Plasma VLDL Fraction \| SEC Fraction:19 \| Genotype:PNPLA3 WT
F22	Sample source:Plasma VLDL Fraction \| SEC Fraction:20 \| Genotype:PNPLA3(I148M)
F23	Sample source:Plasma VLDL Fraction \| SEC Fraction:20 \| Genotype:PNPLA3 WT
F24	Sample source:Plasma VLDL Fraction \| SEC Fraction:21 \| Genotype:PNPLA3(I148M)
F25	Sample source:Plasma VLDL Fraction \| SEC Fraction:21 \| Genotype:PNPLA3 WT
F26	Sample source:Plasma VLDL Fraction \| SEC Fraction:22 \| Genotype:PNPLA3(I148M)
F27	Sample source:Plasma VLDL Fraction \| SEC Fraction:22 \| Genotype:PNPLA3 WT
F28	Sample source:Plasma VLDL Fraction \| SEC Fraction:23 \| Genotype:PNPLA3(I148M)
F29	Sample source:Plasma VLDL Fraction \| SEC Fraction:23 \| Genotype:PNPLA3 WT
F30	Sample source:Plasma VLDL Fraction \| SEC Fraction:24 \| Genotype:PNPLA3(I148M)
F31	Sample source:Plasma VLDL Fraction \| SEC Fraction:24 \| Genotype:PNPLA3 WT
F32	Sample source:Plasma VLDL Fraction \| SEC Fraction:25 \| Genotype:PNPLA3(I148M)
F33	Sample source:Plasma VLDL Fraction \| SEC Fraction:25 \| Genotype:PNPLA3 WT
F34	Sample source:Plasma VLDL Fraction \| SEC Fraction:26 \| Genotype:PNPLA3(I148M)
F35	Sample source:Plasma VLDL Fraction \| SEC Fraction:26 \| Genotype:PNPLA3 WT
F36	Sample source:Plasma VLDL Fraction \| SEC Fraction:27 \| Genotype:PNPLA3(I148M)
F37	Sample source:Plasma VLDL Fraction \| SEC Fraction:27 \| Genotype:PNPLA3 WT
F38	Sample source:Plasma VLDL Fraction \| SEC Fraction:28 \| Genotype:PNPLA3(I148M)
F39	Sample source:Plasma VLDL Fraction \| SEC Fraction:28 \| Genotype:PNPLA3 WT
F40	Sample source:Plasma VLDL Fraction \| SEC Fraction:8 \| Genotype:PNPLA3(I148M)
F41	Sample source:Plasma VLDL Fraction \| SEC Fraction:8 \| Genotype:PNPLA3 WT
F42	Sample source:Plasma VLDL Fraction \| SEC Fraction:9 \| Genotype:PNPLA3(I148M)
F43	Sample source:Plasma VLDL Fraction \| SEC Fraction:9 \| Genotype:PNPLA3 WT
F44	Sample source:Plasma VLDL Fraction \| SEC Fraction:QC Pool \| Genotype:NA

Data matrix