Metabolomics Workbench : NIH Data Repository

Clustering data with heatmap algorithm for Michigan Biomarkers for Refractory Depression (Bluebird) metabolomics pilot study (Study ST000775)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Pair:Pair 1 \| Timepoint:T0 \| Treatment response:No
F2	Pair:Pair 1 \| Timepoint:T0 \| Treatment response:Yes
F3	Pair:Pair 1 \| Timepoint:T2 \| Treatment response:No
F4	Pair:Pair 1 \| Timepoint:T2 \| Treatment response:Yes
F5	Pair:Pair 2 \| Timepoint:T0 \| Treatment response:No
F6	Pair:Pair 2 \| Timepoint:T0 \| Treatment response:Yes
F7	Pair:Pair 2 \| Timepoint:T2 \| Treatment response:No
F8	Pair:Pair 2 \| Timepoint:T2 \| Treatment response:Yes
F9	Pair:Pair 3 \| Timepoint:T0 \| Treatment response:No
F10	Pair:Pair 3 \| Timepoint:T0 \| Treatment response:Yes
F11	Pair:Pair 3 \| Timepoint:T2 \| Treatment response:No
F12	Pair:Pair 3 \| Timepoint:T2 \| Treatment response:Yes
F13	Pair:Pair 4 \| Timepoint:T0 \| Treatment response:No
F14	Pair:Pair 4 \| Timepoint:T0 \| Treatment response:Yes
F15	Pair:Pair 4 \| Timepoint:T2 \| Treatment response:No
F16	Pair:Pair 4 \| Timepoint:T2 \| Treatment response:Yes
F17	Pair:Pair 5 \| Timepoint:T0 \| Treatment response:No
F18	Pair:Pair 5 \| Timepoint:T0 \| Treatment response:Yes
F19	Pair:Pair 5 \| Timepoint:T2 \| Treatment response:No
F20	Pair:Pair 5 \| Timepoint:T2 \| Treatment response:Yes
F21	Pair:Pair 6 \| Timepoint:T0 \| Treatment response:No
F22	Pair:Pair 6 \| Timepoint:T0 \| Treatment response:Yes
F23	Pair:Pair 6 \| Timepoint:T2 \| Treatment response:No
F24	Pair:Pair 6 \| Timepoint:T2 \| Treatment response:Yes
F25	Pair:Pair 7 \| Timepoint:T0 \| Treatment response:No
F26	Pair:Pair 7 \| Timepoint:T0 \| Treatment response:Yes
F27	Pair:Pair 7 \| Timepoint:T2 \| Treatment response:No
F28	Pair:Pair 7 \| Timepoint:T2 \| Treatment response:Yes
F29	Pair:Pair 8 \| Timepoint:T0 \| Treatment response:No
F30	Pair:Pair 8 \| Timepoint:T0 \| Treatment response:Yes
F31	Pair:Pair 8 \| Timepoint:T2 \| Treatment response:No
F32	Pair:Pair 8 \| Timepoint:T2 \| Treatment response:Yes
F33	Pair:Pooled \| Timepoint:Pooled \| Treatment response:Pooled

Data matrix