Clustering data with heatmap algorithm for Diet, genetics and gut microbiome drive dynamic changes in plasma metabolites [cecal] (Study ST000880)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Diet:Chow | Treatment:none | Strain:129Jax
F2	Diet:Chow | Treatment:none | Strain:129Tac
F3	Diet:Chow | Treatment:none | Strain:B6Jax
F4	Diet:HFD | Treatment:metronidazole | Strain:129Jax
F5	Diet:HFD | Treatment:metronidazole | Strain:129Tac
F6	Diet:HFD | Treatment:metronidazole | Strain:B6Jax
F7	Diet:HFD | Treatment:placebo | Strain:129Jax
F8	Diet:HFD | Treatment:placebo | Strain:129Tac
F9	Diet:HFD | Treatment:placebo | Strain:B6Jax
F10	Diet:HFD | Treatment:vancomycin | Strain:129Jax
F11	Diet:HFD | Treatment:vancomycin | Strain:129Tac
F12	Diet:HFD | Treatment:vancomycin | Strain:B6Jax

Data matrix