Clustering data with heatmap algorithm for (Study ST001496)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Incubation_time:0 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:No
F2Incubation_time:0 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F3Incubation_time:0 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F4Incubation_time:0 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F5Incubation_time:0 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:No | Incubated with Bilophila wadsworthia:no
F6Incubation_time:0 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F7Incubation_time:0 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F8Incubation_time:24 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:No
F9Incubation_time:24 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F10Incubation_time:24 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:No | Incubated with Bilophila wadsworthia:no
F11Incubation_time:24 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F12Incubation_time:24 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F13Incubation_time:24 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F14Incubation_time:24 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F15Incubation_time:3 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:No
F16Incubation_time:3h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:No
F17Incubation_time:3 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F18Incubation_time:3h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F19Incubation_time:3 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F20Incubation_time:3h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F21Incubation_time:3 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F22Incubation_time:3h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F23Incubation_time:3 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:No | Incubated with Bilophila wadsworthia:no
F24Incubation_time:3h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:No | Incubated with Bilophila wadsworthia:no
F25Incubation_time:3 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F26Incubation_time:3h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F27Incubation_time:3 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F28Incubation_time:3h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F29Incubation_time:48 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:No
F30Incubation_time:48 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F31Incubation_time:48 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:No | Incubated with Bilophila wadsworthia:no
F32Incubation_time:48 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F33Incubation_time:48 h | Sulfoquinovose (4 mM):No | Taurine (20 mM):Yes | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
F34Incubation_time:48 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:no
F35Incubation_time:48 h | Sulfoquinovose (4 mM):Yes | Taurine (20 mM):No | Incubated with SIHUMI consortia:Yes | Incubated with Bilophila wadsworthia:Yes
Data matrix
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