Perform Volcano plot analysis on selected experimental conditions followed by MS search on significant features

Group1Experimental factorGroup2
2 ()
Categorization:Amhara | Country:Ethiopia | Ethnicity:Amhara | Occupation:Agriculturalist | Sex:F (11)
Categorization:Amhara | Country:Ethiopia | Ethnicity:Amhara | Occupation:Agriculturalist | Sex:M (18)
Categorization:Dizi | Country:Ethiopia | Ethnicity:Dizi | Occupation:Agropastoralist | Sex:F (18)
Categorization:Dizi | Country:Ethiopia | Ethnicity:Dizi | Occupation:Agropastoralist | Sex:M (11)
Categorization:Hadza_settled | Country:Tanzania | Ethnicity:Hadza | Occupation:Hunter-Gatherer | Sex:F (17)
Categorization:Hadza_settled | Country:Tanzania | Ethnicity:Hadza | Occupation:Hunter-Gatherer | Sex:M (13)
Categorization:Hadza_traditional | Country:Tanzania | Ethnicity:Hadza | Occupation:Hunter-Gatherer | Sex:F (10)
Categorization:Hadza_traditional | Country:Tanzania | Ethnicity:Hadza | Occupation:Hunter-Gatherer | Sex:M (19)
Categorization:Hadza_traditional | Country:Tanzania | Ethnicity:Hadza | Occupation:Hunter-Gatherer | Sex:nan (1)
Categorization:Hamer | Country:Ethiopia | Ethnicity:Hamer | Occupation:Pastoralist | Sex:F (17)
Categorization:Hamer | Country:Ethiopia | Ethnicity:Hamer | Occupation:Pastoralist | Sex:M (13)
Categorization:Herero | Country:Botswana | Ethnicity:Herero/Na | Occupation:Pastoralist | Sex:F (1)
Categorization:Herero | Country:Botswana | Ethnicity:Herero | Occupation:Pastoralist | Sex:F (24)
Categorization:Herero | Country:Botswana | Ethnicity:Herero | Occupation:Pastoralist | Sex:M (5)
Categorization:Ju | Country:Botswana | Ethnicity:Ju|'Hoan | Occupation:Hunter-Gatherer | Sex:F (7)
Categorization:Ju | Country:Botswana | Ethnicity:Ju|'Hoan | Occupation:Hunter-Gatherer | Sex:M (4)
Categorization:Ju | Country:Botswana | Ethnicity:Ju|'Hoan/!Xoo | Occupation:Hunter-Gatherer | Sex:F (1)
Categorization:Ju | Country:Botswana | Ethnicity:Ju|'Hoan/!Xoo | Occupation:Hunter-Gatherer | Sex:M (1)
Categorization:Ju | Country:Botswana | Ethnicity:Kaukau/Ju|'Hoan | Occupation:Hunter-Gatherer | Sex:M (1)
Categorization:Ju | Country:Botswana | Ethnicity:Kaukau/Naro | Occupation:Hunter-Gatherer | Sex:M (1)
Categorization:Ju | Country:Botswana | Ethnicity:Kaukau | Occupation:Hunter-Gatherer | Sex:F (1)
Categorization:Ju | Country:Botswana | Ethnicity:Kaukau | Occupation:Hunter-Gatherer | Sex:M (4)
Categorization:Ju | Country:Botswana | Ethnicity:Kaukau/Tsoa/Naro/Na | Occupation:Hunter-Gatherer | Sex:M (1)
Categorization:Ju | Country:Botswana | Ethnicity:Kaukau/Tsoa | Occupation:Hunter-Gatherer | Sex:M (1)
Categorization:Ju | Country:Botswana | Ethnicity:Kaukau/Tswana | Occupation:Hunter-Gatherer | Sex:F (1)
Categorization:Ju | Country:Botswana | Ethnicity:Naro/Kaukau/Nama/Na | Occupation:Hunter-Gatherer | Sex:M (1)
Categorization:Ju | Country:Botswana | Ethnicity:Naro/Kaukau | Occupation:Hunter-Gatherer | Sex:F (6)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Kgalagadi/Tswana | Occupation:Agropastoralist | Sex:F (1)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Mbukushu | Occupation:Agropastoralist | Sex:F (5)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Mbukushu | Occupation:Agropastoralist | Sex:M (1)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Tswana/Herero | Occupation:Agropastoralist | Sex:F (1)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Tswana/Na | Occupation:Agropastoralist | Sex:F (1)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Tswana/Na | Occupation:Agropastoralist | Sex:M (1)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Tswana | Occupation:Agropastoralist | Sex:F (11)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Tswana | Occupation:Agropastoralist | Sex:M (6)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Yeyi | Occupation:Agropastoralist | Sex:F (1)
Categorization:Mb_Ts_Ye | Country:Botswana | Ethnicity:Yeyi | Occupation:Agropastoralist | Sex:M (2)
Categorization:Mursi | Country:Ethiopia | Ethnicity:Mursi | Occupation:Pastoralist | Sex:F (7)
Categorization:Mursi | Country:Ethiopia | Ethnicity:Mursi | Occupation:Pastoralist | Sex:M (23)
Categorization:Naro | Country:Botswana | Ethnicity:Naro | Occupation:Hunter-Gatherer | Sex:F (21)
Categorization:Naro | Country:Botswana | Ethnicity:Naro | Occupation:Hunter-Gatherer | Sex:M (9)
Categorization:Qimant | Country:Ethiopia | Ethnicity:Qimant | Occupation:Agropastoralist | Sex:F (18)
Categorization:Qimant | Country:Ethiopia | Ethnicity:Qimant | Occupation:Agropastoralist | Sex:M (12)
Categorization:Sabue | Country:Ethiopia | Ethnicity:Sabue | Occupation:Hunter-Gatherer | Sex:F (11)
Categorization:Sabue | Country:Ethiopia | Ethnicity:Sabue | Occupation:Hunter-Gatherer | Sex:M (19)
Categorization:Sandawe | Country:Tanzania | Ethnicity:Sandawe | Occupation:Hunter-Gatherer | Sex:F (17)
Categorization:Sandawe | Country:Tanzania | Ethnicity:Sandawe | Occupation:Hunter-Gatherer | Sex:M (13)
Categorization:Weyto | Country:Ethiopia | Ethnicity:Weyto | Occupation:Hunter-Gatherer | Sex:F (16)
Categorization:Weyto | Country:Ethiopia | Ethnicity:Weyto | Occupation:Hunter-Gatherer | Sex:M (14)
Categorization:!Xoo | Country:Botswana | Ethnicity:!Xoo | Occupation:Hunter-Gatherer | Sex:F (20)
Categorization:!Xoo | Country:Botswana | Ethnicity:!Xoo | Occupation:Hunter-Gatherer | Sex:M (9)

Filtering Parameters
Select threshold % for selection below:
Option 1: No filtering
Option 2: Filter by Sum (Analytes whose sum for all samples falls below the threshold % will be excluded)
Option 3: Filter by Mean (Analytes whose mean for all samples falls below the threshold % will be excluded)
Option 4: Filter by Median (Analytes whose median for all samples falls below the threshold % will be excluded)
Option 5: Filter by Sample threshold       must exceed the above threshold per analyte
In order for an analyte to be retained, the % of samples in one/both groups which are non-zero must exceed the threshold.
Option 6: Remove all analytes containing null values
Sample Normalization Parameters
Normalize samples by:
Volcano Plot Parameters
P-value cutoff: Fold-change cutoff:
MS Search Parameters
Search Refmet database
MS Ion polarity:NEGATIVE MS search m/z tolerance:
Ion adducts(choose at least one)
Negative mode:
[M-H]- [M+Cl]- [M+HCOO]- [M+OAc]- [M-CH3]- [M-2H]2- [M-3H]3- [M-H-Ser]-

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