RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0135796
RefMet name1-Hydroxyvitamin D3 3-D-glucopyranoside
Systematic name(5Z,7E)-(1S,3R)-9,10-seco-5,7,10(19)-cholestatrien-3-D-glucopyranoside
SynonymsPubChem Synonyms
Exact mass576.366220 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC33H52O8View other entries in RefMet with this formula
Molecular descriptors
Molfile36211 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C33H52O8/c1-18(2)8-6-9-19(3)24-13-14-25-21(10-7-15-33(24,25)5)11-12-22-16-23(17-26(34)20(22)4)40-32-29(37)27(35)28(36)30(
41-32)31(38)39/h11-12,18-19,23-30,32,34-37H,4,6-10,13-17H2,1-3,5H3,(H,38,39)/b21-11+,22-12-/t19-,23-,24-,25+,26+,27+,28+,29-,30+,3
2+,33-/m1/s1
InChIKeyHVQXEPIFQWOABC-IORSAUDJSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCC(C)CCC[C@@H](C)[C@H]1CC[C@H]2/C(=C/C=C\3/C[C@H](C[C@@H](C3=C)O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@@H](C(=O)O)O3)O)O)O)/CCC[C@]12C
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSterol Lipids
Main ClassSecosterols
Sub ClassVitamin D3
Distribution of 1-Hydroxyvitamin D3 3-D-glucopyranoside in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting 1-Hydroxyvitamin D3 3-D-glucopyranoside
External Links
Pubchem CID24779645
LIPID MAPSLMST03020671
ChEBI ID166749
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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