RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet ID	RM0136098
RefMet name	3-Hydroxy-N6,N6,N6-trimethyl-lysine
Systematic name	[(5S)-5-amino-5-carboxy-4-hydroxypentyl]trimethylazanium
Synonyms	PubChem Synonyms
Exact mass	205.155218 (neutral)	Calculate m/z: (Choose adduct) [M+H]+ [M+H-H2O]+ [M.]+ [M+2H]2+ [M+3H]3+ [M+4H]4+ [M+K]+ [M+2K]2+ [M+2K-H]+ [M+Na]+ [M+2Na]2+ [M+2Na-H]+ [M+Li]+ [M+2Li]2+ [M+NH4]+ [M.CH3]+ [M+Ag]+ [M+H+CH3OH]+ [M+H+CH3CN]+ [M+H+2CH3CN]+ [M+Na+CH3CN]+ [M.NaFormate+H]+ [M.NH4Formate+H]+ [M.TMSi]+ [M.tBuDMSi]+ [M+H-Hexose]+ [M+H-EtnP]+ [M+H-SerP]+ [M-H]- [M-H-H2O]- [M-CH3]- [M-2H]2- [M-3H]3- [M-4H]4- [M+Cl]- [M+OAc]- [M+Na-2H]- [M+K-2H]- [M.Formate]- [M.NaFormate-H]- [M.NH4Formate-H]- [M.F]- [M-H-Ser]- [M.HF2]- M(neutral)    View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
Formula	C9H21N2O3	View other entries in RefMet with this formula
Molecular descriptors
Molfile	37789 (Download molfile/View MW Metabolite Database details)
InChI	InChI=1S/C9H20N2O3/c1-11(2,3)6-4-5-7(12)8(10)9(13)14/h7-8,12H,4-6,10H2,1-3H3/p+1/t7?,8-/m0/s1
InChIKey	ZRJHLGYVUCPZNH-MQWKRIRWSA-O	View other enantiomers/diastereomers of this metabolite in RefMet
SMILES	C[N+](C)(C)CCCC([C@@H](C(=O)O)N)O Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super Class	Organic acids
Main Class	Amino acids and peptides
Sub Class	Amino acids
Distribution of 3-Hydroxy-N6,N6,N6-trimethyl-lysine in NMDR studies
Species	Plot Species distribution
Sample source	Plot Sample source(tissue) distribution
Platform	Platform (MS/NMR) used for detection
Chromatography	Chromatography methods used for detection
Studies	NMDR Studies reporting 3-Hydroxy-N6,N6,N6-trimethyl-lysine
External Links
Pubchem CID	439460
ChEBI ID	15786
KEGG ID	C01259
HMDB ID	HMDB0001422
Chemspider ID	388565
MetaCyc ID	3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE
Structural annotation level
Annotation level	1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving 3-Hydroxy-N6,N6,N6-trimethyl-lysine

Rxn ID	KEGG Reaction	Enzyme
R03451	N6,N6,N6-Trimethyl-L-lysine + 2-Oxoglutarate + Oxygen <=> (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine + Succinate + CO2	N6,N6,N6-Trimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating)

Table of KEGG human pathways containing 3-Hydroxy-N6,N6,N6-trimethyl-lysine

Pathway ID	Human Pathway	# of reactions
hsa00310	Lysine degradation	1