RefMet Compound Details

MW structure50347 (View MW Metabolite Database details)
RefMet nameCDP-ribitol
Systematic namecytidine 5'-{3-[(2R,3R,4S)-2,3,4,5-tetrahydroxypentyl] dihydrogen diphosphate}
SMILESc1cn([C@H]2[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OC[C@H]([C@H]([C@H](CO)O)O)O)O2)O)O)c(=O)nc1N   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass537.076098 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC14H25N3O15P2View other entries in RefMet with this formula
InChIInChI=1S/C14H25N3O15P2/c15-9-1-2-17(14(24)16-9)13-12(23)11(22)8(31-13)5-30-34(27,28)32-33(25,26)29-4-7(20)10(21)6(19)3-18/h1-2,6-8
,10-13,18-23H,3-5H2,(H,25,26)(H,27,28)(H2,15,16,24)/t6-,7+,8+,10-,11+,12+,13+/m0/s1
InChIKeyDPJKHFICSGCNIR-HRENORGGSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine rNDP
Pubchem CID165130
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving CDP-ribitol

Rxn IDKEGG ReactionEnzyme
R02921 CTP + D-Ribitol 5-phosphate <=> Diphosphate + CDP-ribitolCTP:D-ribitol-5-phosphate cytidylyltransferase
R12294 Phospho-core M3 + CDP-ribitol <=> G13093 + CMPPhospho-core M3 + CDP-ribitol <=> G13093 + CMP

Table of KEGG human pathways containing CDP-ribitol

Pathway IDHuman Pathway# of reactions
hsa00515 Mannose type O-glycan biosynthesis 2
hsa00040 Pentose and glucuronate interconversions 1
  logo