RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0138923
RefMet nameCMP
Systematic name{[(2R,3S,4R,5R)-5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}phosphonic acid
SynonymsPubChem Synonyms
Exact mass323.051855 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC9H14N3O8PView other entries in RefMet with this formula
Molecular descriptors
Molfile37072 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C9H14N3O8P/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H2,10,11,15)(H2,16,17,18)/t4
-,6-,7-,8-/m1/s1
InChIKeyIERHLVCPSMICTF-XVFCMESISA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESc1cn([C@H]2[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O2)O)O)c(=O)nc1N
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine rNMP
Distribution of CMP in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
StudiesNMDR Studies reporting CMP
External Links
Pubchem CID6131
ChEBI ID17361
KEGG IDC00055
HMDB IDHMDB0000095
Chemspider ID5901
MetaCyc IDCMP
Spectral data for CMP standards
BMRB ID(NMR)View NMR spectra
NP-MRD ID(NMR)View NMR spectra
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving CMP

Rxn IDKEGG ReactionEnzyme
R00511 CMP + H2O <=> Cytidine + Orthophosphatecytidine-5'-monophosphate phosphohydrolase
R00512 ATP + CMP <=> ADP + CDPATP:CMP phosphotransferase
R00513 ATP + Cytidine <=> ADP + CMPATP:cytidine 5'-phosphotransferase
R00514 CDP + H2O <=> CMP + OrthophosphateCDP phosphohydrolase
R00515 CTP + H2O <=> CMP + DiphosphateCTP diphosphohydrolase (diphosphate-forming)
R00516 UTP + Cytidine <=> UDP + CMPUTP:cytidine 5'-phosphotransferase
R00517 GTP + Cytidine <=> GDP + CMPGTP:cytidine 5'-phosphotransferase
R00962 ITP + Cytidine <=> IDP + CMPITP:cytidine 5'-phosphotransferase
R01548 dATP + Cytidine <=> dADP + CMPdATP:cytidine 5'-phosphotransferase
R02091 dGTP + Cytidine <=> dGDP + CMPdGTP:cytidine 5'-phosphotransferase
R02096 dTTP + Cytidine <=> dTDP + CMPdTTP:cytidine 5'-phosphotransferase
R02371 dCTP + Cytidine <=> dCDP + CMPdCTP:cytidine 5'-phosphotransferase
R02372 dUTP + Cytidine <=> dUDP + CMPdUTP:cytidine 5'-phosphotransferase

Table of KEGG human pathways containing CMP

Pathway IDHuman Pathway# of reactions
hsa00240 Pyrimidine metabolism 6
hsa01100 Metabolic pathways 2
hsa01232 Nucleotide metabolism 2
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