RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0135527
RefMet nameCer 18:0;O3/20:0
Alternative nameCer(t18:0/20:0)
Systematic nameN-(eicosanoyl)-4R-hydroxysphinganine
SynonymsPubChem Synonyms
Sum CompositionCer 38:0;O3 View other entries in RefMet with this sum composition
Exact mass611.585259 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC38H77NO4View other entries in RefMet with this formula
Molecular descriptors
Molfile30693 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C38H77NO4/c1-3-5-7-9-11-13-15-17-18-19-20-21-23-25-27-29-31-33-37(42)39-35(34-40)38(43)36(41)32-30-28-26-24-22-16-14-12-1
0-8-6-4-2/h35-36,38,40-41,43H,3-34H2,1-2H3,(H,39,42)/t35-,36+,38-/m0/s1
InChIKeyHFJJUTILDZFUOE-BEAALGTASA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO)[C@@H]([C@@H](CCCCCCCCCCCCCC)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassCeramides
Sub ClassDHCer (Dihydroceramides)
Distribution of Cer 18:0;O3/20:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Cer 18:0;O3/20:0
External Links
Pubchem CID70678852
LIPID MAPSLMSP02030007
ChEBI ID67029
KEGG IDC12126
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Cer 18:0;O3/20:0

Rxn IDKEGG ReactionEnzyme
R06517 Acyl-CoA + Sphinganine <=> CoA + Dihydroceramideacyl-CoA:sphingosine N-acyltransferase
R06518 Dihydroceramide + H2O <=> Fatty acid + SphinganineN-acylsphingosine amidohydrolase
R06519 Dihydroceramide + 2 Ferrocytochrome b5 + Oxygen + 2 H+ <=> N-Acylsphingosine + 2 Ferricytochrome b5 + 2 H2Odihydroceramide,ferrocytochrome b5:oxygen oxidoreductase (4,5-dehydrogenating)
R06526 Dihydroceramide + 2 Ferrocytochrome b5 + Oxygen + 2 H+ <=> Phytoceramide + 2 Ferricytochrome b5 + H2Odihydroceramide,ferrocytochrome b5:oxygen oxidoreductase (C4-hydroxylating)

Table of KEGG human pathways containing Cer 18:0;O3/20:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
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