RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0001831
RefMet nameCer 19:0;O3/24:0
Alternative nameCer(t19:0/24:0)
Systematic nameN-(tetracosanoyl)-4R-hydroxynonadecasphinganine
SynonymsPubChem Synonyms
Sum CompositionCer 43:0;O3 View other entries in RefMet with this sum composition
Exact mass681.663509 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC43H87NO4View other entries in RefMet with this formula
Molecular descriptors
Molfile87885 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C43H87NO4/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-26-28-30-32-34-36-38-42(47)44-40(39-45)43(48)41(46)37-35-33-31-29-2
7-25-16-14-12-10-8-6-4-2/h40-41,43,45-46,48H,3-39H2,1-2H3,(H,44,47)/t40-,41+,43-/m0/s1
InChIKeyJHTDKXHMHXLXQB-MUUZQFHDSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO)[C@@H]([C@@H](CCCCCCCCCCCCCCC)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassCeramides
Sub ClassPhytoCer (Phytoceramides)
Distribution of Cer 19:0;O3/24:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Cer 19:0;O3/24:0
External Links
Pubchem CID145715045
LIPID MAPSLMSP02039AQX
KEGG IDC12126
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Cer 19:0;O3/24:0

Rxn IDKEGG ReactionEnzyme
R06517 Acyl-CoA + Sphinganine <=> CoA + Dihydroceramideacyl-CoA:sphingosine N-acyltransferase
R06518 Dihydroceramide + H2O <=> Fatty acid + SphinganineN-acylsphingosine amidohydrolase
R06519 Dihydroceramide + 2 Ferrocytochrome b5 + Oxygen + 2 H+ <=> N-Acylsphingosine + 2 Ferricytochrome b5 + 2 H2Odihydroceramide,ferrocytochrome b5:oxygen oxidoreductase (4,5-dehydrogenating)
R06526 Dihydroceramide + 2 Ferrocytochrome b5 + Oxygen + 2 H+ <=> Phytoceramide + 2 Ferricytochrome b5 + H2Odihydroceramide,ferrocytochrome b5:oxygen oxidoreductase (C4-hydroxylating)

Table of KEGG human pathways containing Cer 19:0;O3/24:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
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